NNCCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCTTTAATATTACTTAATATACTTTAAATGTTATTATAAAAAAA
TACAAGAAAAATATGTATCCAATTTAACCAGACCCAAAGAAACATCTCAG
GGAAGTTCTGTATAGTTAGAGCAGCCATTTGCAGCAGACGGGTGCAGCTT
GACCTGGGGTTCATACTTTAACACCAAATGTATTTTAACACTTATTTACC
CCACCACATGCAAAAGCATGCGCATGCACATACAAGCACGTGCACACATA
CATACATATACACACATACTCACCATAACAAACTTACAACTAGAGAAATA
TCTAGCATTACTTCTTCTTAAGTGTATGCAAAGCAGCCCCAGGATGACCA
AGACCAAGAAGAAGAAGATTTCTTAAGCTTTTCCACTTGTAACAGTTTCC
CCCAAAGAAAATAGCAGGGAGCTCTAGATGTGCATATATAGATCAAACTT
TACTGATAATAAACATTAAAAGATATTTTACAGAAACTTCTGTTGTACAC
ATAATTCTACATTAGGAAAAGAGTGAGTTTACATACTAATGAGAGGTGTG
CTTTCTTTTTAATTTATTAACTTTACATTCCAATTGCTGTCCCCCGCCTG
ATCCTCCCCTCCCCAAGTCCCTCATCAN

NTTCGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXACATGTTCACCAGAGGATGAG
TATGCATTGCTTACACTTGTTCATACGTGTTCATGTATGTAGATCCATAC
GTTCACATACACATAAATAAACACATATATAGAACTGAGTAAAAAGGACC
CCTGGATCTTCTGTTTTAGAAAGTGATAGGCATGTGCTCGCAGTCTGACA
TGCGGGGGAGGGGCGGTGCGATCCTCTGTCTGTGAAAAACTCCATCCCGA
GTTGGAAGGATTTGGGGGCACTCTTTTTGTCTTGATGAACCCTCCCCCTA
TTTTTGCACAGCAGATGGAGAGTTCCCCCCTCTATTGGTATCGAAACGAC
CTCGGAATTTACTCATCTTCAGCCCCCCACCTTTCTTCCCGTTCTCTTCT
CGTCTTGTGCCCCTTCTCGCCTGCTTCCCTTTCCCGAACCCCAATCTTTT
TCTGATATCTCTTGTACGTCATTATTACGTACACATTCATCTCCTTTCGC
CGTCACTCTTCGCTCCTCTTGTACTTGCGCGACCTGACACTCCCACATTC
ATCCGTCCCACTACTCATCCAATCCTATTCTTCCGATTTTACTCCTTCTC
TCGTCTCTTTCTCCTACTCTACTTTTCTTGTTTACCGCGCCGTTATTTCC
CCCCTTGTTTCGTTACCATTG

Query= MSMg01no078_d12.b1 MSMg01no078_d12.b1 CHROMAT_FILE:
MSMg01no078_d12.b1 PHD_FILE: MSMg01no078_d12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:26:29 2005
         (630 letters)



>mm_chr18_84508177_84509206
          Length = 1030

 Score = 1162 bits (601), Expect = 0.0
 Identities = 619/625 (99%), Gaps = 1/625 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctttaatattacttaatatactttaaatgttattataaaaaaatacaagaaaaat 64
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 910 gaattctttaatattatttaatatactttaaatgttattataaaaaaatacaagaaaaat 851

                                                                       
Query: 65  atgtatccaatttaaccagacccaaagaaacatctcagggaagttctgtatagttagagc 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 850 atgtatccaatttaaccagacccaaagaaacatctcagggaagttctgtatagttagagc 791

                                                                       
Query: 125 agccatttgcagcagacgggtgcagcttgacctggggttcatactttaacaccaaatgta 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 790 agccatttgcagcagacgggtgcagcttgacctggggttcatactttaacaccaaatgta 731

                                                                       
Query: 185 ttttaacacttatttaccccaccacatgcaaaagcatgcgcatgcacatacaagcacgtg 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 ttttaacacttatttaccccaccacatgcaaaagcatgcgcatgcacatacaagcacgtg 671

                                                                       
Query: 245 cacacatacatacatatacacacatactcaccataacaaacttacaactagagaaatatc 304
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 670 cacacatacatacatatacacacatactcaccaaaacaaacttacaactagagaaatatc 611

                                                                       
Query: 305 tagcattacttcttcttaagtgtatgcaaagcagccccaggatgaccaagaccaagaaga 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 tagcattacttcttcttaagtgtatgcaaagcagccccaggatgaccaagaccaagaaga 551

                                                                       
Query: 365 agaagatttcttaagcttttccacttgtaacagtttcccccaaagaaaatagcagggagc 424
           | ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 550 acaagatttcttaagcttttccatttgtaacaatttcccccaaagaaaatagcagggagc 491

                                                                       
Query: 425 tctagatgtgcatatatagatcaaactttactgataataaacattaaaagatattttaca 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 tctagatgtgcatatatagatcaaactttactgataataaacattaaaagatattttaca 431

                                                                       
Query: 485 gaaacttctgttgtacacataattctacattaggaaaagagtgagtttacatactaatga 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 gaaacttctgttgtacacataattctacattaggaaaagagtgagtttacatactaatga 371

                                                                       
Query: 545 gaggtgtgctttctttttaatttattaactttacattccaattgctgtcccccgcctgat 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 gaggtgtgctttctttttaatttattaactttacattccaattgctgtcccccgcctgat 311

                                    
Query: 605 cctcccctccccaagtccctcatca 629
           |||||| ||||||||||||||||||
Sbjct: 310 cctccc-tccccaagtccctcatca 287


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 630
Length of database: 1030
Length adjustment: 10
Effective length of query: 620
Effective length of database: 1020
Effective search space:   632400
Effective search space used:   632400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)