Query= MSMg01no078_p17.b1 MSMg01no078_p17.b1 CHROMAT_FILE:
MSMg01no078_p17.b1 PHD_FILE: MSMg01no078_p17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:27:28 2005
(580 letters)
>mm_chr18_81898675_81899654
Length = 980
Score = 1038 bits (537), Expect = 0.0
Identities = 562/575 (97%), Gaps = 8/575 (1%)
Strand = Plus / Minus
Query: 6 gaattccatcacttcgcctgggccgagacggattatcgagccttgccatgcagccattca 65
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 gaattccatcacttagcctgggccgagacggattatcgagccttgccatgcagccattca 623
Query: 66 gacaccaatgctggagagcagctgcttcccgactgtcagggaaccgcagagtgcaaacaa 125
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 gacaccaatgccagagagcagctgcttcccgactgtcagggaaccgcagagtgcaaacaa 563
Query: 126 tataaatttatatggattttcttttaaggaaaataggaaagtaaaacattaaaagtaaac 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 tataaatttatatggattttcttttaaggaaaataggaaagtaaaacattaaaagtaaac 503
Query: 186 attcatttttcaattgctcccgacgcaccctccacattgtctccccgtggaagcattcat 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 attcatttttcaattgctcccgacgcaccctccacattgtctccccgtggaagcattcat 443
Query: 246 ttttaattcttttgggatcccgggcacccttttatttcaagtagtaattcacatcttaat 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ttttaattcttttgggatcccgggcacccttttatttcaagtagtaattcacatcttaat 383
Query: 306 taatatacagtaatcaaagagataagcaaggataagtgcttcccagcttggctttatttg 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 taatatacagtaatcaaagagataagcaaggataagtgcttcccagcttggctttatttg 323
Query: 366 ttaaggccaattttttatgtaagtgcataaaaggatttgagtgctgagttctctagctca 425
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 ttaaggttaattttttatgtaagtgcataaaaggatttgagtgctgagttctctagctca 263
Query: 426 tgaaccatttaatttttatttaaaaagatagaaagaaagaaaaaagtcacaaagtttagt 485
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tgaaccatttaatttttatttaaaaagatagaaagaaagaaaaaagtcacaaagttt--- 206
Query: 486 cttgccatggccaacactcactcaaagccacctcccagtagaggtcacgctggccaagaa 545
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 -----catggccaacactcactcaaagccacctcccagtagaggtcacgctggccaagaa 151
Query: 546 catgagttcatcgttagtcttcaggatgttctctg 580
|||||||||||||||||||||||||||||||||||
Sbjct: 150 catgagttcatcgttagtcttcaggatgttctctg 116
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 580
Length of database: 980
Length adjustment: 10
Effective length of query: 570
Effective length of database: 970
Effective search space: 552900
Effective search space used: 552900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no078_p17.g1 MSMg01no078_p17.g1 CHROMAT_FILE:
MSMg01no078_p17.g1 PHD_FILE: MSMg01no078_p17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:27:28 2005
(340 letters)
>mm_chr18_81745404_81746143
Length = 740
Score = 611 bits (316), Expect = e-179
Identities = 334/340 (98%)
Strand = Plus / Plus
Query: 1 agtcattttaattggggtcccagttttgttatgtatatttatttgtatatttatgggata 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 201 agtcattttaattggggtcccagttttgttatgtaaatttatttgtatatttatgggata 260
Query: 61 caggcgtagatctgcactctcttccatacatttataagctggctggtggcaatgtccatt 120
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 261 caggcgtagatctgcactctcttccatacatttaaaagctggctggtggcaatgtccatt 320
Query: 121 gagggtgctgtcagtacccattggaggctgaactgacaaggtgctgtgcaggaaggacca 180
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 321 gagggtgctgtcagtacccattggaggctgaactgagaaggtgctgtgcaggaaggacca 380
Query: 181 cgcgccgtggatgattggtcagctctcaggggagttctgaatctcgtggagttctaattc 240
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 381 cgcgccgtggatgattggtcagctctcaggggagttctgaatcttgtggagttctaattc 440
Query: 241 atcatctgaaaagcgtatggacttccacacaccctgctggttgctgagaagggtatgaag 300
||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||
Sbjct: 441 atcatctgaaaagcgtatggacttccacacaccttgctggttgctgagaagggaatgaag 500
Query: 301 gatctgtcctgttattcctttaaggaggacaagggacaga 340
||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gatctgtcctgttattcctttaaggaggacaagggacaga 540
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 340
Length of database: 740
Length adjustment: 9
Effective length of query: 331
Effective length of database: 731
Effective search space: 241961
Effective search space used: 241961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
