Query= MSMg01no079_h21.b1 MSMg01no079_h21.b1 CHROMAT_FILE:
MSMg01no079_h21.b1 PHD_FILE: MSMg01no079_h21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:08 2005
(691 letters)
>mm_chr18_88867198_88868288
Length = 1091
Score = 988 bits (511), Expect = 0.0
Identities = 538/547 (98%)
Strand = Plus / Minus
Query: 5 gaattcagacaatgtctatctatctaaatgtctactgacataatcagtctcattcctcct 64
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 gaattcagacaatgtctatgtatctaaatgtctactgacataatcagtctcattcctcct 488
Query: 65 taaccaagtgtaatttatttagcagcttccgacagtgaatgtattgtttcaattctgaag 124
||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||
Sbjct: 487 taaccaagtgtaatttatttatcagcttccgacagtgaatgaattgtttcaattctgaag 428
Query: 125 ggctgaagtaaaagtatccctgtagcagttcacatttctgagctaaggcaggtttctttt 184
||||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||||
Sbjct: 427 ggctgaagtaaaagtatccctgtagcagttcacatttctgagccaagacaggcttctttt 368
Query: 185 catagtggtagctgcaaagggaacttccttactgctcctatgtggcccccctgtcttcat 244
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 367 catagtggtagctgcaaagggaacttccttactgctcctatgtggcccctctgtcttcat 308
Query: 245 gacaacaaggctccagggcttgtctatctttaaatattgtcattccttagcatttctgca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 gacaacaaggctccagggcttgtctatctttaaatattgtcattccttagcatttctgca 248
Query: 305 actctgatatcaactgcaaaatttctgctcaaaattttaaaacttaattctgtaagaatt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 actctgatatcaactgcaaaatttctgctcaaaattttaaaacttaattctgtaagaatt 188
Query: 365 tcatgcaatatattttgatcaaactcattcctcaactcctcctaccaattccttctagat 424
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 tcatgcaatgtattttgatcaaactcattcctcaactcctcctaccaattccttctagat 128
Query: 425 caactcttcctacccctccaacttattttctctcttaaaacatttaatagccaagtgact 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 caactcttcctacccctccaacttattttctctcttaaaacatttaatagccaagtgact 68
Query: 485 caactcgacagtgctgtccatgtgcttctgggtatgggaccatcccctgaaacatgctta 544
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 67 caactcgacagtgctgtccatgtgcttctgggtatggggccatcccctgaaacatgctta 8
Query: 545 acctaaa 551
|||||||
Sbjct: 7 acctaaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 691
Length of database: 1091
Length adjustment: 10
Effective length of query: 681
Effective length of database: 1081
Effective search space: 736161
Effective search space used: 736161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no079_h21.g1 MSMg01no079_h21.g1 CHROMAT_FILE:
MSMg01no079_h21.g1 PHD_FILE: MSMg01no079_h21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:08 2005
(585 letters)
>mm_chr18_88721930_88722914
Length = 985
Score = 632 bits (327), Expect = 0.0
Identities = 353/363 (97%), Gaps = 3/363 (0%)
Strand = Plus / Plus
Query: 223 ggtgtgggcataagatcctcaccctagttgcctagaagtcagtcttccactagcagcctt 282
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 426 ggtgtgggcataagatcctcaccctagttgcctggaagtcagtcttccactagcagcctt 485
Query: 283 tggatgaagacatagaactctcagctcctcctgtgccatgcctgcctggatactgccatg 342
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 486 tggatgaagacatagaactctcagttcctcctgtgccatgcctgcctggatactgccatg 545
Query: 343 ctcccatcttgatgataatggaccgaacctctgaacctgtaagccagcctcaattaaatg 402
|||||| |||||||||||||||| ||||||||||||||||||||||||| ||||||||||
Sbjct: 546 ctcccaccttgatgataatggactgaacctctgaacctgtaagccagccccaattaaatg 605
Query: 403 ttgttttttataagacttgccttggtcatggtgtctgttcacagcagtaaaaacctaact 462
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 tt---ttttataagacttgccttggtcatggtgtctgttcacagcagtaaaaacctaact 662
Query: 463 aagataccctcccacccaggtcctaaatcttaactatcagacagagagtcatacccttgt 522
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 aagacaccctcccacccaggtcctaaatcttaactatcagacagagagtcatacccttgt 722
Query: 523 ctctcatggttctcaggccttcaggtctggctgaatcatagtacatattttccagactct 582
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 ctcccatggttctcaggccttcaggtctggctgaatcatagtacatattttccagactct 782
Query: 583 tca 585
|||
Sbjct: 783 tca 785
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 585
Length of database: 985
Length adjustment: 10
Effective length of query: 575
Effective length of database: 975
Effective search space: 560625
Effective search space used: 560625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
