Query= MSMg01no080_e01.b1 MSMg01no080_e01.b1 CHROMAT_FILE:
MSMg01no080_e01.b1 PHD_FILE: MSMg01no080_e01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:29:06 2005
(353 letters)
>mm_chr18_84412102_84412854
Length = 753
Score = 623 bits (322), Expect = 0.0
Identities = 346/362 (95%), Gaps = 13/362 (3%)
Strand = Plus / Minus
Query: 5 gaattcttttgttgccaattaacttattttcagagaaatcttgtatcacctatgtctttt 64
||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 gaattcttttggtgttaattaacttattttcagagaaatcttgtatcacctatgtctttt 677
Query: 65 gattaattcatcatttgttgttatcctttaacataccatgtagaacttttacctaaagta 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 gattaattcatcatttgttgttatcctttaacataccatgtagaacttttacctaaagta 617
Query: 125 tacccaagagaagatagatgtgctgcc-------------tttttttttttttttttttt 171
||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 616 tacccaagagaagatagatgtgctgccttttttttttttttttttttttttttttttttt 557
Query: 172 tttgtcaagctagtgaaacaatgcagtgtgaaattccaagctcttttctcctgaggagca 231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 tttgtcaagctagtgaaacaatgcagtgtgaaattccaagctcttttctcctgaggagca 497
Query: 232 cacacttcgtagaacctgttagcacgctcactttcaaatgtgctcacagattgttatcct 291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 cacacttcgtagaacctgttagcacgctcactttcaaatgtgctcacagattgttatcct 437
Query: 292 gcttgttactaaacagtccaactagtgactctgaaaatttagagtaatgcatttgaagat 351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 gcttgttactaaacagtccaactagtgactctgaaaatttagagtaatgcatttgaagat 377
Query: 352 ct 353
||
Sbjct: 376 ct 375
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 353
Length of database: 753
Length adjustment: 9
Effective length of query: 344
Effective length of database: 744
Effective search space: 255936
Effective search space used: 255936
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no080_e01.g1 MSMg01no080_e01.g1 CHROMAT_FILE:
MSMg01no080_e01.g1 PHD_FILE: MSMg01no080_e01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:29:06 2005
(320 letters)
>mm_chr18_84258637_84259356
Length = 720
Score = 572 bits (296), Expect = e-168
Identities = 314/320 (98%)
Strand = Plus / Plus
Query: 1 tgattgtgaaacttttggaaacctgttggaaccttagtgtttcgcgtgagcagtgggtgg 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 201 tgattgtgaaacttttggaaacctgttggaaccttagtgttttgcgtgagcagtgggtgg 260
Query: 61 gagtgagtggagtgcgtgggtggagactttctgaaagggtggcgcgtgtatgtccttagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagtgagtggagtgcgtgggtggagactttctgaaagggtggcgcgtgtatgtccttagc 320
Query: 121 atgctttggctgcgcatgaagcagaggattgcttcatcctgtgatgaaatgctgagactg 180
|||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgctttggccgtgcatgaagcagaggattgcttcatcctgtgatgaaatgctgagactg 380
Query: 181 tggagaataaaaatttgaaccctgccgacctaaaaagggcttgagctgtgttcacataga 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 381 tggagaataaaaatttgaaccctgccgacctaaaaagggcttgagctgtgttcacataaa 440
Query: 241 gcgtccagagtacaccaatgatttgttacaagtggagatgagaatagactgaaaagcttt 300
|||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||
Sbjct: 441 gcgtccagagtacaccaatgatttgttagaagtggaaatgagaatagactgaaaagcttt 500
Query: 301 ccgagcaaacttcattagag 320
||||||||||||||||||||
Sbjct: 501 ccgagcaaacttcattagag 520
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 720
Length adjustment: 9
Effective length of query: 311
Effective length of database: 711
Effective search space: 221121
Effective search space used: 221121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
