Query= MSMg01no083_e05.b1 MSMg01no083_e05.b1 CHROMAT_FILE:
MSMg01no083_e05.b1 PHD_FILE: MSMg01no083_e05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:32:56 2005
(367 letters)
>mm_chr18_84896700_84897466
Length = 767
Score = 665 bits (344), Expect = 0.0
Identities = 356/360 (98%)
Strand = Plus / Plus
Query: 4 ggaattctgagatatccgcagtcagagtcaagcagcggctgtaaatgcccggtcgtctcg 63
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctgagatatacgcagtcagagtcaagcagcggctgtaaatgcccggtcgtctcg 263
Query: 64 gcctcgcttgacaccacatgtggccaaatgagtcatgaaagcttgtggcttccagtcagc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gcctcgcttgacaccacatgtggccaaatgagtcatgaaagcttgtggcttccagtcagc 323
Query: 124 ttttgggtttgaaattatttgcgtgtaagcaccaggagtttgttttcttgactttaaggc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ttttgggtttgaaattatttgcgtgtaagcaccaggagtttgttttcttgactttaaggc 383
Query: 184 acatcttataatcaactcagaaacaataaagctgactcatgtgaaactaccctcccgcct 243
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 384 acatcttataatcaactcagaaacaataaagctgactcatgtgaaactacccgcccgcct 443
Query: 244 ttgcaaagaacacgctggcatatctgatcgtggttcaaaggtcatcttgtttagcctggc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ttgcaaagaacacgctggcatatctgatcgtggttcaaaggtcatcttgtttagcctggc 503
Query: 304 cctgggttatacctcccttgtgcgcatctcaccgggctgtactgtcactgtcactctgta 363
|||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||
Sbjct: 504 cctgggttatacctcccttgtgtgcatctcaccgggctgcactgtcactgtcactctgta 563
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 367
Length of database: 767
Length adjustment: 9
Effective length of query: 358
Effective length of database: 758
Effective search space: 271364
Effective search space used: 271364
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no083_e05.g1 MSMg01no083_e05.g1 CHROMAT_FILE:
MSMg01no083_e05.g1 PHD_FILE: MSMg01no083_e05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:32:56 2005
(423 letters)
>mm_chr18_85024396_85025219
Length = 824
Score = 812 bits (420), Expect = 0.0
Identities = 423/424 (99%), Gaps = 1/424 (0%)
Strand = Plus / Minus
Query: 1 ttcatctgtgaaaggtaagcagccacaaaaagcaaaacttcattcgtcaagaccccaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ttcatctgtgaaaggtaagcagccacaaaaagcaaaacttcattcgtcaagaccccaaaa 565
Query: 61 aggctaagtgagtcagaagctaacagcctctgcaaggcgggatgctttcaatgaatattc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 aggctaagtgagtcagaagctaacagcctctgcaaggcgggatgctttcaatgaatattc 505
Query: 121 aagacttgctttaaaaatcgcagaatctcagcatcactaggaaaacattgtgtggggagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aagacttgctttaaaaatcgcagaatctcagcatcactaggaaaacattgtgtggggagc 445
Query: 181 acagacaacttgccttcaacgcggcctaggagatgttacgggcacccac-gcccagaacg 239
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 444 acagacaacttgccttcaacgcggcctaggagatgttacgggcacccactgcccagaacg 385
Query: 240 gaaaggcaacaggagtcttacccgatgctctcttcctcccttccacagctctgcttaaac 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gaaaggcaacaggagtcttacccgatgctctcttcctcccttccacagctctgcttaaac 325
Query: 300 ctggctcaaccacagaacagggaaatgcaaacttgctccttggcccttaacacctgtttt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ctggctcaaccacagaacagggaaatgcaaacttgctccttggcccttaacacctgtttt 265
Query: 360 cattccaaataatggtctctcggatttctatcatcactaacctgtctaatgccatgatct 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cattccaaataatggtctctcggatttctatcatcactaacctgtctaatgccatgatct 205
Query: 420 tata 423
||||
Sbjct: 204 tata 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 423
Length of database: 824
Length adjustment: 9
Effective length of query: 414
Effective length of database: 815
Effective search space: 337410
Effective search space used: 337410
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
