Query= MSMg01no084_p09.b1 MSMg01no084_p09.b1 CHROMAT_FILE:
MSMg01no084_p09.b1 PHD_FILE: MSMg01no084_p09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:35:08 2005
(530 letters)
>mm_chr18_57874552_57875481
Length = 930
Score = 1002 bits (518), Expect = 0.0
Identities = 527/530 (99%)
Strand = Plus / Minus
Query: 1 tggccttgaactcagaaatccactacctctgcctcccaagtgctgggactaaaggcatgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 tggccttgaactcagaaatccactacctctgcctcccaagtgctgggactaaaggcatgc 748
Query: 61 accaccactgcccagctttcacgtattcacttcttaacaaaatgttttctttttaaaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 accaccactgcccagctttcacgtattcacttcttaacaaaatgttttctttttaaaaag 688
Query: 121 caaaagaagaatgacacaataggtcagacatctcattcatatgtttccatttattatcga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 caaaagaagaatgacacaataggtcagacatctcattcatatgtttccatttattatcga 628
Query: 181 tttatgatctagcaaatgctaagaatcttaggaattggcagcagggctaccatgaagact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 tttatgatctagcaaatgctaagaatcttaggaattggcagcagggctaccatgaagact 568
Query: 241 tgtgggcatttgttctggctactttccaagatgaccctcccattgtcctctggttctaac 300
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 tgcgggcatttgttctggctactttccaagatgaccctcccattgtcctctggttctaac 508
Query: 301 caccttgataaacaaagagttagagcatacatccatttctgcatcccacacttttatctc 360
||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 507 caccttgataaacaaagagttagagcatacatccatttctgcaacccagacttttatctc 448
Query: 361 tatcttaagattgcttaaatttaatttatattatgtagtaattggtcaacataattcttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 tatcttaagattgcttaaatttaatttatattatgtagtaattggtcaacataattcttg 388
Query: 421 gagccaagtaataccttcaaatgtcaaggtttgcctagggttgacaatataagtttcttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 gagccaagtaataccttcaaatgtcaaggtttgcctagggttgacaatataagtttcttt 328
Query: 481 ttttctcaatttgtttttaatcaattgaataacttgattttatacttagg 530
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ttttctcaatttgtttttaatcaattgaataacttgattttatacttagg 278
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 530
Length of database: 930
Length adjustment: 10
Effective length of query: 520
Effective length of database: 920
Effective search space: 478400
Effective search space used: 478400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no084_p09.g1 MSMg01no084_p09.g1 CHROMAT_FILE:
MSMg01no084_p09.g1 PHD_FILE: MSMg01no084_p09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:35:08 2005
(434 letters)
>mm_chr18_57726792_57727623
Length = 832
Score = 779 bits (403), Expect = 0.0
Identities = 425/433 (98%), Gaps = 2/433 (0%)
Strand = Plus / Plus
Query: 1 aaatatgtttaactgactttcaaagatctttttaaaaatgtctttattaggttttttttt 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaatatgtttaactgactctcaaagatctttttaaaaatgtctttattaggttttttttt 260
Query: 61 ttcatgaaatatatttgatcatgttcctccctcctcaattactcacagattccctcctcc 120
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 261 --catgaaatatatttgatcatgttcctccctcctcaattactcccagattccctcctcc 318
Query: 121 cacctccccactcaactttatgctttctctttctccctctctctcaaaaacaaaataaaa 180
||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 319 cacctccccacccaactttatgctttctttttctccctctctctcaaaaacaaaataaaa 378
Query: 181 ataacaacctgaaatcaaaaacaaataaaaaaattagtaagactaaaaatatcaaagtaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ataacaacctgaaatcaaaaacaaataaaaaaattagtaagactaaaaatatcaaagtaa 438
Query: 241 agcaaaacaaaacaacccatcccccaatatcctacctgctcccaaataccatggagttgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 agcaaaacaaaacaacccatcccccaatatcctacctgctcccaaataccatggagttgg 498
Query: 301 tgttctgttggccaactacttcaggatatggagcctgtaaggcacatagtttagataccc 360
|||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 499 tgttctgttggccaactacttcaggatatggagcctgtaaggtatatagtttagataccc 558
Query: 361 agtgatgccccattgaaggaaaatgatttcccctttcccagctggaatcaactgcaaata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 agtgatgccccattgaaggaaaatgatttcccctttcccagctggaatcaactgcaaata 618
Query: 421 gcttattatttag 433
|||||||||||||
Sbjct: 619 gcttattatttag 631
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 434
Length of database: 832
Length adjustment: 9
Effective length of query: 425
Effective length of database: 823
Effective search space: 349775
Effective search space used: 349775
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
