Query= MSMg01no085_g04.b1 MSMg01no085_g04.b1 CHROMAT_FILE:
MSMg01no085_g04.b1 PHD_FILE: MSMg01no085_g04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:36:05 2005
(214 letters)
>mm_chr18_89932918_89933531
Length = 614
Score = 389 bits (201), Expect = e-113
Identities = 210/213 (98%), Gaps = 2/213 (0%)
Strand = Plus / Plus
Query: 1 aagattttaactgtgttttcccatattatgtcttcctccaaaacaaaacttggtgactct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aagattttaactgtgttttcccatattatgtcttcctccaaaacaaaacttggtgactct 260
Query: 61 agttgagccaatgtgctgagtaatacaaaagcatttattatacatagtgctgacttaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agttgagccaatgtgctgagtaatacaaaagcatttattatacatagtgctgacttaatt 320
Query: 121 caacctggctgtgtgatacacacacacaattacacaagtcggtatacgtcatttgatgaa 180
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 321 caacctggctgtgtgatacacacacacaattacacaagtcggtatatgtcatttgatgaa 380
Query: 181 ctgtatggactga-ctaaccacttgattgttta 212
||||||||||||| | |||||||||||||||||
Sbjct: 381 ctgtatggactgagc-aaccacttgattgttta 412
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 214
Length of database: 614
Length adjustment: 9
Effective length of query: 205
Effective length of database: 605
Effective search space: 124025
Effective search space used: 124025
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no085_g04.g1 MSMg01no085_g04.g1 CHROMAT_FILE:
MSMg01no085_g04.g1 PHD_FILE: MSMg01no085_g04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:36:05 2005
(237 letters)
>mm_chr18_90046997_90047633
Length = 637
Score = 389 bits (201), Expect = e-113
Identities = 228/237 (96%)
Strand = Plus / Minus
Query: 1 gcatgtacatgattatttcagcttgccattgataggccgataatgatggtgatgatggtg 60
||||||||||||||||||||||||| | ||||| || ||||||||||||||||||||||
Sbjct: 437 gcatgtacatgattatttcagcttgttaatgataagctgataatgatggtgatgatggtg 378
Query: 61 agtaggatgaagaaaagttctagaagaattcactccttactggatatgacaggcttctct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 agtaggatgaagaaaagttctagaagaattcactccttactggatatgacaggcttctct 318
Query: 121 agctccaatggcataccaacacttttgttccagttactgttaggataaccagaccttcag 180
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 agctccaatggcatacaaacacttttgttccagttactgttaggataaccagaccttcag 258
Query: 181 aaagtacacattttggaacttactgttacaggacactttagattttacaaaggccag 237
|||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||
Sbjct: 257 aaagtacacattttggaagttactgttacaggacactttagattttataaatgccag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 237
Length of database: 637
Length adjustment: 9
Effective length of query: 228
Effective length of database: 628
Effective search space: 143184
Effective search space used: 143184
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
