Query= MSMg01no086_p24.b1 MSMg01no086_p24.b1 CHROMAT_FILE:
MSMg01no086_p24.b1 PHD_FILE: MSMg01no086_p24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:38:57 2005
(239 letters)
>mm_chr18_26184049_26184685
Length = 637
Score = 412 bits (213), Expect = e-119
Identities = 232/239 (97%), Gaps = 2/239 (0%)
Strand = Plus / Minus
Query: 1 cagagatccagcaagaatattaataccctgatactatgccacagctttaaaaaacttcta 60
|||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 437 cagagatccagcaagaatattaataccctg--actataccacagctttaaaaaacttcta 380
Query: 61 ttgatgatagtgaaaaatcaaacaagatagtatctatcactttttccaaaggtgatccac 120
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 tcgatgatagtgaaaaatcaaacaagatagtatctatcactttttccaaaggtgatccac 320
Query: 121 acgatgtgttagaactgctatgcagacacaagctcagtactgtaaatctatgctgttgtg 180
|||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 319 acgatgtgttagaactgctacgcagacacaagctcagtactgtagatctatgctgttgtg 260
Query: 181 aacaaacttagtctgcctggatgctcaaaggtacatatctgcattctgtattttccgtc 239
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 259 aacaaacttagtctgcctggatgctcaagggtacatatctgcattctgtattttccgtc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 637
Length adjustment: 9
Effective length of query: 230
Effective length of database: 628
Effective search space: 144440
Effective search space used: 144440
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no086_p24.g1 MSMg01no086_p24.g1 CHROMAT_FILE:
MSMg01no086_p24.g1 PHD_FILE: MSMg01no086_p24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:38:57 2005
(104 letters)
>mm_chr18_26017525_26018028
Length = 504
Score = 201 bits (104), Expect = 9e-57
Identities = 104/104 (100%)
Strand = Plus / Plus
Query: 1 catttttgagcaatgaaaagatctattccattgaatattgtgatttttcttttacaggga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catttttgagcaatgaaaagatctattccattgaatattgtgatttttcttttacaggga 260
Query: 61 caacagttatgatggaatggcatggctgcagtaatagactaaga 104
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caacagttatgatggaatggcatggctgcagtaatagactaaga 304
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 104
Length of database: 504
Length adjustment: 8
Effective length of query: 96
Effective length of database: 496
Effective search space: 47616
Effective search space used: 47616
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
|
