Query= MSMg01no088_d21.b1 MSMg01no088_d21.b1 CHROMAT_FILE:
MSMg01no088_d21.b1 PHD_FILE: MSMg01no088_d21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:40:39 2005
(282 letters)
>mm_chr18_68021590_68022270
Length = 681
Score = 491 bits (254), Expect = e-143
Identities = 275/282 (97%), Gaps = 1/282 (0%)
Strand = Plus / Minus
Query: 1 atcacacactgcaaaaaaccaaccctttcaaacacataaatcctcacacaagcatggcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 481 atcacacactgcaaaaaaccaaccctttcaaacacataaatcctcacacaatcatggcac 422
Query: 61 tgacaaacagccgcactatctccttaggtctgggtaggaagaacctcagttattgatacc 120
||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct: 421 tgacaaacagccgcactatctccttaggtctgggtaggaagtacctcagttatt-atacc 363
Query: 121 actgactgggagagaccttctaccatcagagatgacaaaatctgaaccaaaatgtaaacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 actgactgggagagaccttctaccatcagagatgacaaaatctgaaccaaaatgtaaacc 303
Query: 181 atcatctttgccactctgggccctctgtaagttaatggacttctccgagcctgatttttc 240
|||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 302 atcatctttgccactctgggccctctgtaagttaatggacttctccgagccttagttttc 243
Query: 241 cttagctatctgcaacagtcgcgatgttctatctcagaggta 282
|||||||||||| |||||| ||||||||||||||||||||||
Sbjct: 242 cttagctatctggaacagtagcgatgttctatctcagaggta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 681
Length adjustment: 9
Effective length of query: 273
Effective length of database: 672
Effective search space: 183456
Effective search space used: 183456
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no088_d21.g1 MSMg01no088_d21.g1 CHROMAT_FILE:
MSMg01no088_d21.g1 PHD_FILE: MSMg01no088_d21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:40:39 2005
(145 letters)
>mm_chr18_67884838_67885382
Length = 545
Score = 265 bits (137), Expect = 8e-76
Identities = 143/145 (98%)
Strand = Plus / Plus
Query: 1 atacagcaatcccatctctcagtgtctgtctgcatacttgctcagcagcctcatggcgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atacagcaatcccatctctcagtgtctgtctgcatacttgctcagcagcctcatggcgct 260
Query: 61 gcggagtggaaagctcagaatgtttaggtcatcaaggaacattctttggtttgattggtt 120
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gccgagtggaaagctcagaatgtttaggtcatcaaggaacattctttggtttgattggtt 320
Query: 121 gcggttgggtttggtttttttgttg 145
| |||||||||||||||||||||||
Sbjct: 321 ggggttgggtttggtttttttgttg 345
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 145
Length of database: 545
Length adjustment: 8
Effective length of query: 137
Effective length of database: 537
Effective search space: 73569
Effective search space used: 73569
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
