Query= MSMg01no089_b05.b1 MSMg01no089_b05.b1 CHROMAT_FILE:
MSMg01no089_b05.b1 PHD_FILE: MSMg01no089_b05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:41:46 2005
(619 letters)
>mm_chr18_28859850_28860868
Length = 1019
Score = 1154 bits (597), Expect = 0.0
Identities = 612/617 (99%), Gaps = 2/617 (0%)
Strand = Plus / Plus
Query: 5 gaattcagtgggaatctc-aaaattaggattaaaaatgatctgcttgaaaa-aaaaacaa 62
|||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct: 203 gaattcagtgggaatctcaaaaattaggattaaaaatgatctgcttgaaaacaaaaacaa 262
Query: 63 acaaacaaacaaacaaaaccaatttgaatatgaaacccagttgcatggtcttcagggtgg 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 acaaacaaacaaacaaaaccaatttgaatatgaaacccagttgcatggtcttcagggtgg 322
Query: 123 tattccaaaacctgtaagtccctcctatcttaacactcctttgctggaaacagctcctgg 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tattccaaaacctgtaagtccctcctatcttaacactcctttgctggaaacagctcctgg 382
Query: 183 taccaaatggattttagtaatgttctacagagaatggtgaatagtctcttaaaattagag 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 taccaaatggattttagtaatgttctacagagaatggtgaatagtctcttaaaattagag 442
Query: 243 gtcaacagcatatgttttcaggtttcccttgtggacatagtcctcagtaggattcattct 302
|||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 443 gtcaacagcataggttttcaggtttcccttgtggacagagtcctcagtaggattcattct 502
Query: 303 atagaagttgacacagcttctggtgtgaggatgaaaattattgaattgaacactcgtata 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 atagaagttgacacagcttctggtgtgaggatgaaaattattgaattgaacactcgtata 562
Query: 363 gcctgtataatatgaacaatttccagtctatgaaaccttggaacctcaaaatcattgtca 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 gcctgtataatatgaacaatttccagtctatgaaaccttggaacctcaaaatcattgtca 622
Query: 423 aattcttcaccaatgtcactctgttcaacacaattgtgatcaatattcctggttttcagc 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 aattcttcaccaatgtcactctgttcaacacaattgtgatcaatattcctggttttcagc 682
Query: 483 ttgtctatatctagaatgaactacaatctagaaatggaaagcagacctttaatccagatc 542
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 683 ttgtctatatctagaatgaagtacaatctagaaatggaaagcagacctttaatccagatc 742
Query: 543 ttaaggctggatgacacagccttctgttctgactaggatcatgacatggagattttcagc 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 ttaaggctggatgacacagccttctgttctgactaggatcatgacatggagattttcagc 802
Query: 603 cacagtggcaatgaaaa 619
|||||||||||||||||
Sbjct: 803 cacagtggcaatgaaaa 819
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 619
Length of database: 1019
Length adjustment: 10
Effective length of query: 609
Effective length of database: 1009
Effective search space: 614481
Effective search space used: 614481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no089_b05.g1 MSMg01no089_b05.g1 CHROMAT_FILE:
MSMg01no089_b05.g1 PHD_FILE: MSMg01no089_b05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:41:46 2005
(426 letters)
>mm_chr18_29008750_29009575
Length = 826
Score = 777 bits (402), Expect = 0.0
Identities = 420/426 (98%)
Strand = Plus / Minus
Query: 1 cataatattctgaattaaataatagaaagatatcgtgagagtggaatttggctagtgaga 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 579 cataatattctgaattaaataatagaaagatatcgtgagagtggaatttggctagtgaaa 520
Query: 61 aatgaaactgaaacctagcaagccctagggagtatgttctttcaactcataggcttaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 aatgaaactgaaacctagcaagccctagggagtatgttctttcaactcataggcttaagt 460
Query: 121 caaaccttgagtgatataggcgacaaacaagaactgccatctttatactaaggtggaatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 caaaccttgagtgatataggcgacaaacaagaactgccatctttatactaaggtggaatc 400
Query: 181 acagagggttttaatgttcagaattattttttattaagacattttagggcctgatcatat 240
||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 399 acagagggttttaatgttcagaattattttttattaagaaattttaggggctgatcatat 340
Query: 241 tttaagtgctaggcacttgtattatgaaggaagagggacagagcaggtgatgggaaggaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 tttaagtgctaggcacttgtattatgaaggaagagggacagagcaggtgatgggaaggaa 280
Query: 301 gaagactagacagtaggggtgaatcaactgtcctggcgaagccattttctgatgcttaaa 360
|||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 gaagactagagagtaggggcgaatcaactgtcctggcgaagccattttctgatgcttaaa 220
Query: 361 taagaagggaaagagggttaggggaacgccagggccaaaaagtgggagtgggtgggtagg 420
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 219 taagaagggaaagagggttaggggaatgccagggccaaaaagtgggagtgggtgggtagg 160
Query: 421 ggagtg 426
||||||
Sbjct: 159 ggagtg 154
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 426
Length of database: 826
Length adjustment: 9
Effective length of query: 417
Effective length of database: 817
Effective search space: 340689
Effective search space used: 340689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
