Query= MSMg01no096_g15.b1 MSMg01no096_g15.b1 CHROMAT_FILE:
MSMg01no096_g15.b1 PHD_FILE: MSMg01no096_g15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:52:45 2005
(248 letters)
>mm_chr18_83770043_83770690
Length = 648
Score = 456 bits (236), Expect = e-133
Identities = 245/248 (98%)
Strand = Plus / Minus
Query: 1 attctagaacatctggttggcttcattttacataaatcagcagactgtcaacccctgaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 attctagaacatctggttggcttcattttacataaatcagcagactgtcaacccctgaca 389
Query: 61 ggtacctgtttactttcacgtcattaagtgccatttttccagaaacagcaagatacaggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 ggtacctgtttactttcacgtcattaagtgccatttttccagaaacagcaagatacaggc 329
Query: 121 aacacaacatgtaattaagcaaaaacaatgcaaataaacataagtaatgcagacgaggaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 aacacaacatgtaattaagcaaaaacaatgcaaataaacataagtaatgcagacgaggaa 269
Query: 181 agcatatatctacagaagcacagagtgagatatctacagaagcacttacaactgaaccct 240
|||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 268 agcagatatctacagaagcacagagtgagatatctacagaagcacttacaactgagccct 209
Query: 241 agtctacc 248
|||||||
Sbjct: 208 ggtctacc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 648
Length adjustment: 9
Effective length of query: 239
Effective length of database: 639
Effective search space: 152721
Effective search space used: 152721
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no096_g15.g1 MSMg01no096_g15.g1 CHROMAT_FILE:
MSMg01no096_g15.g1 PHD_FILE: MSMg01no096_g15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:52:45 2005
(274 letters)
>mm_chr18_83637067_83637742
Length = 676
Score = 487 bits (252), Expect = e-142
Identities = 270/276 (97%), Gaps = 2/276 (0%)
Strand = Plus / Plus
Query: 1 caaggatttgaagggtttatctgagctagtaaacaaaccaaaggtctctctggcttggag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caaggatttgaagggtttatctgagctagtaaacaaaccaaaggtctctctggcttggag 260
Query: 61 gctgataagaaggccaagtctagggccag-tatccagcctcacacccaggtctcccgcca 119
|||||||||||||||||||||||| || | ||||||||||||||||||||||||||||||
Sbjct: 261 gctgataagaaggccaagtctaggacctgctatccagcctcacacccaggtctcccgcca 320
Query: 120 ttctgctgagggg-tctggctgtactgcagacacagccttccagacccttccaaaccttc 178
||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 321 ttctgctgagggggtctggctgtactgcagacacagccttccagacccttccaagccttc 380
Query: 179 ctaaatgactgcatgccacagttacagtcctcaggggccgaatttcattctctgaaaatt 238
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 381 ctaaatgactgcatgccacagttaccgtcctcaggggccgaatttcattctctgaaaatt 440
Query: 239 ggtaccaggcccccttggctggtgagcttgaggagt 274
||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggtaccaggcccccttggctggtgagcttgaggagt 476
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 274
Length of database: 676
Length adjustment: 9
Effective length of query: 265
Effective length of database: 667
Effective search space: 176755
Effective search space used: 176755
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
