Query= MSMg01no097_c19.b1 MSMg01no097_c19.b1 CHROMAT_FILE:
MSMg01no097_c19.b1 PHD_FILE: MSMg01no097_c19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:53:49 2005
(140 letters)
>mm_chr18_69264520_69265059
Length = 540
Score = 246 bits (127), Expect = 5e-70
Identities = 136/139 (97%)
Strand = Plus / Plus
Query: 2 ctatcagctcttcattaaaactaatcaaaaggtgagagaggtagggtttacaaaatatga 61
||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||
Sbjct: 202 ctatcagctcttcattaaaaccaatcaaaaggtgagagagggagggtttacaaaatatga 261
Query: 62 tgtagccattgaataacagtaccaaatcccctttggcactcaactctggaggcatagaaa 121
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 262 tgtagccattgaataacagtaccaaaccccctttggcactcaactctggaggcatagaaa 321
Query: 122 tcagcatttgaagaatgca 140
|||||||||||||||||||
Sbjct: 322 tcagcatttgaagaatgca 340
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 140
Length of database: 540
Length adjustment: 8
Effective length of query: 132
Effective length of database: 532
Effective search space: 70224
Effective search space used: 70224
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no097_c19.g1 MSMg01no097_c19.g1 CHROMAT_FILE:
MSMg01no097_c19.g1 PHD_FILE: MSMg01no097_c19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:53:49 2005
(285 letters)
>mm_chr18_69435321_69436005
Length = 685
Score = 466 bits (241), Expect = e-136
Identities = 263/273 (96%), Gaps = 5/273 (1%)
Strand = Plus / Minus
Query: 12 cactcttcttatttgaactcaatggtctctgataattatgattcacctttctgctactgt 71
|||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||
Sbjct: 371 cactcttcttatttgaactcaatggtctttgataattattattcacctttctgctactgt 312
Query: 72 gatatatattgatttattgtggtaccatagatggaatcttggccccaaacatatgaagca 131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 gatatatattgatttattgtggtaccatagatggaatcttggccccaaacatatgaagca 252
Query: 132 gcattctgccactaagctatatcttcagttcattttcaattttatttatttatttattta 191
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 gcattctgccactaagctatatcttcagttcattttcaattttatttatttattt----- 197
Query: 192 ttttttggtgaaggtctcactaaaattatccaggctggtcttgaacttactctgtgatat 251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 196 ttttttggtgaaggtctcactaaaattatccaggctggtcttgaacttactctgtgacat 137
Query: 252 gttcaggtcttgaacttgtgaatccccatgttg 284
| ||||||||||||||||||||||||||||||
Sbjct: 136 gggcaggtcttgaacttgtgaatccccatgttg 104
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 685
Length adjustment: 9
Effective length of query: 276
Effective length of database: 676
Effective search space: 186576
Effective search space used: 186576
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
