CACTXXXXXXXXXXXXXXXXXXXXXXXXNATCAAAAAGAGGATCCGCGGA
ATTCAAAGTATCTAACTGAAATAATAGGAAACAACCACTGTCATTATTTA
TCTACAAATGCTCAAAGATTCAAATATTTTCCAGGAAATTTAGTGGATAA
AATGACTGAGCATAACACAAACATATGATAATATTCATTGATATAATAAG
ATCTCAGAGGTCTTCATTACAATTACAAAATAAATAACTTTTTATATAAA
ATTAGGACTATCAAAATGGGCATGATTGCTTCACAAATTGTTTATGGTAA
AAATGATAAACATTTTATCTGTGATATTTAAGTCATTTACTTAATTATAA
ACAAAGTGCAAGGCAAATAACATGGAATTTCAGATGTTAGAGTGTGAAGA
AAATACAATTTACTAAATATATCTTGTTAAACCTAAATAGTAAAGTGAAT
GCTTTGTTCTTAAGCATGTCTTTTACTAAATATCTCTGTCCTGTATAAGA
TAAAATCTTTTCATATACCTGTTTATCAATTATGTAACTAATCTATATGA
AATACTGATTGATTTAGTAATTTTGTTTTCATTGGCCAAATTAATCTGGG
TCAAATTTTCCATTATGTCTATATTTATAAGTTGAAAATCCTACAATTAT
AAAAAATGTCCTCATTTTATTAAAACAATCAAAGGATCAT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXTTTGATGACTTTGAAAAATAGCCAAAAAGGAGGCAGCATCTGACAT
ATATATTTAGATATATGCATATGTTTAGATGTTTTTGATCAGTCAGCAAG
AAATGATTTGGTTTCTCATCTTAGCAACAAAGAAAACAGTCTTTTAATAC
ACTATGAGACAATGATGCTTGTTAACAATATTGCTCTTTCGCAACAAGAT
TGTAATCACCCAAGGATCTCATAACATGCTTTTACCGGTGCTACTAATTT
ATGTTACCTGTAACTCCTTAAATTCTTGTTAAAAAGCAGGACCAAGCTTA
ACCAATAATATTAACTGTATCACTAAAATGATTCTACCTTCATGGAACTA
GATTTGTTGCTTGTAATGATAATTTTGTGGTTAGATAAAATGGGTTGATG
ATCCATTAAAATTTTACAAATATAACCTAAAACACATTGAACAATATATT
ACTAGAAGAATCAGGCTTCATTGACAATACTGATCAAGTGTATGAAACTC
TAGTTGTCATGAGATAGCAGATACTATGAATTTAAACAATATTGTATTAG
GTAAACACAAAAACCAGCTTCCTACCAATAGACACCTAGCAAAATAACCT
ATGAATTTCATATCCAG

Query= MSMg01no098_l02.b1 MSMg01no098_l02.b1 CHROMAT_FILE:
MSMg01no098_l02.b1 PHD_FILE: MSMg01no098_l02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:55:53 2005
         (528 letters)



>mm_chr18_89807714_89808641
          Length = 928

 Score =  948 bits (490), Expect = 0.0
 Identities = 499/502 (99%)
 Strand = Plus / Minus

                                                                       
Query: 27  taactgaaataataggaaacaaccactgtcattatttatctacaaatgctcaaagattca 86
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 920 taactgaaataataggaaacaaccactgtcattatttatctacaaatgctcaaagattca 861

                                                                       
Query: 87  aatattttccaggaaatttagtggataaaatgactgagcataacacaaacatatgataat 146
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 860 agtattttccaggaaatttagtggataaaatgactgagcataacacaaacatatgataat 801

                                                                       
Query: 147 attcattgatataataagatctcagaggtcttcattacaattacaaaataaataactttt 206
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 attcattgatataataagatctcagaggtcttcattacaattacaaaataaataactttt 741

                                                                       
Query: 207 tatataaaattaggactatcaaaatgggcatgattgcttcacaaattgtttatggtaaaa 266
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 tatataaaattaggactatcaaaatgggcatgattgcttcacaaattgtttatggtaaaa 681

                                                                       
Query: 267 atgataaacattttatctgtgatatttaagtcatttacttaattataaacaaagtgcaag 326
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 atgataaacattttatctgtgatatttaagtcatttacttaattataaacaaagtgcaag 621

                                                                       
Query: 327 gcaaataacatggaatttcagatgttagagtgtgaagaaaatacaatttactaaatatat 386
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 620 gcaaataacatggaatttcagatattagagtgtgaagaaaatacaatttactaaatatat 561

                                                                       
Query: 387 cttgttaaacctaaatagtaaagtgaatgctttgttcttaagcatgtcttttactaaata 446
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 560 cttgttaaacctaaatagtaaagtgaatgctttgttcttaagcatggcttttactaaata 501

                                                                       
Query: 447 tctctgtcctgtataagataaaatcttttcatatacctgtttatcaattatgtaactaat 506
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tctctgtcctgtataagataaaatcttttcatatacctgtttatcaattatgtaactaat 441

                                 
Query: 507 ctatatgaaatactgattgatt 528
           ||||||||||||||||||||||
Sbjct: 440 ctatatgaaatactgattgatt 419


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 528
Length of database: 928
Length adjustment: 10
Effective length of query: 518
Effective length of database: 918
Effective search space:   475524
Effective search space used:   475524
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no098_l02.g1 MSMg01no098_l02.g1 CHROMAT_FILE:
MSMg01no098_l02.g1 PHD_FILE: MSMg01no098_l02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:55:53 2005
         (500 letters)



>mm_chr18_89664879_89665778
          Length = 900

 Score =  951 bits (492), Expect = 0.0
 Identities = 498/500 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttgatgactttgaaaaatagccaaaaaggaggcagcatctgacatatatatttagatat 60
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 tttgatgactttgaaaaatagccaaaaaggaggcagcatctgacatatatatctagatat 260

                                                                       
Query: 61  atgcatatgtttagatgtttttgatcagtcagcaagaaatgatttggtttctcatcttag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgcatatgtttagatgtttttgatcagtcagcaagaaatgatttggtttctcatcttag 320

                                                                       
Query: 121 caacaaagaaaacagtcttttaatacactatgagacaatgatgcttgttaacaatattgc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caacaaagaaaacagtcttttaatacactatgagacaatgatgcttgttaacaatattgc 380

                                                                       
Query: 181 tctttcgcaacaagattgtaatcacccaaggatctcataacatgcttttaccggtgctac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tctttcgcaacaagattgtaatcacccaaggatctcataacatgcttttaccggtgctac 440

                                                                       
Query: 241 taatttatgttacctgtaactccttaaattcttgttaaaaagcaggaccaagcttaacca 300
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 441 taatttatgttacctgtaactccttaaattcttgttaaaaagcaggaccaagtttaacca 500

                                                                       
Query: 301 ataatattaactgtatcactaaaatgattctaccttcatggaactagatttgttgcttgt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ataatattaactgtatcactaaaatgattctaccttcatggaactagatttgttgcttgt 560

                                                                       
Query: 361 aatgataattttgtggttagataaaatgggttgatgatccattaaaattttacaaatata 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aatgataattttgtggttagataaaatgggttgatgatccattaaaattttacaaatata 620

                                                                       
Query: 421 acctaaaacacattgaacaatatattactagaagaatcaggcttcattgacaatactgat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 acctaaaacacattgaacaatatattactagaagaatcaggcttcattgacaatactgat 680

                               
Query: 481 caagtgtatgaaactctagt 500
           ||||||||||||||||||||
Sbjct: 681 caagtgtatgaaactctagt 700


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 500
Length of database: 900
Length adjustment: 10
Effective length of query: 490
Effective length of database: 890
Effective search space:   436100
Effective search space used:   436100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)