TGCGCCGCTATACGACTCCTATTCGGAGAGGTCCGCGGAATTCAGGTCTG
CCAGGCTCGATCGTGAGACTGCATCAAAGGGGACAAGGATGTTCCACTTG
TCCTTTTAAAAAGCACCATGAGAACATGAAGCTGGTATTGGCAGGGAGAG
GCAGTTTCTGTGTTGTAATAACTGCTGCCGTAGGGGAGGGAGGGTCCAGG
AACAGGTGAAAATAGAATTCTCCAGAGGCAGGTGGCACGAGACAAGCTGC
CCATGACCTACTTCTTGGACTCTCTGATAGAGACTTGTAAGTATGAGACA
CGCCTTCTGGTCCTGACCAGAAAACCAGCAGAGTCATACAGAGTCTGATA
AATGCTAGAATCCCACTGAGGGAAGCCAGTGTCTGCAGTTAAGAGTACCC
GAGAGTTCCAATAATCCATAGAGGATGTAGCAAGATCACTCTGTGAATGA
GACTGGGTGGTGTCAGGCAGCCTGGAGCTCCAGCTGAAGGAGCTTACTTG
TAAGTAACAGACCAGGAATGACAAGGACTCTATGGGAAGTCAAGGCTACG
GGTGGTACTAACTTGCACGAAGCTCTGTGTCTGATCCCTAATGCTGCATG
CAATCACAAGTCTGTGGTGGTAGACACAAGAGGACCAGTTTCCGGTCATC
TTTATCTACTCTGCTAGTTCAAGATGAGTGCGTACTAATAGATCTCTCTC
AACAN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXTCTCCTGCCACTGGTGAGGCAGATTGGAGGAACCCATTTCTCCA
TAAGTGTATTTGGCTAAAGAATAAGAATTATTTTAAAACACCGGTAAGAA
TTTTTAGTTTTCTGGGTTTTCATGGAAAGCAACCATTGTAAATGAACTTG
TGAAACTTGCTGGCATTGAGGTCTGTTGGATCCTGGAGGGTGTCAGGCTG
TCCCTTTCCTTATGCTTGGTGGCCTTGAGCATGAACCTTGCCCTCAGATC
AATCTGGTGGTTCGAACTCTGCACAAACACTCTGGGAAAATAGCATTCCC
ACCTCAAGGTCAACTGCAAGCACAAACCCCATAGTTCTATGCCAGAAGAC
CTTACTCTCACCCCAAGGGCTTTAAAACATTTACACCAGCATTAGAAGGT
GCTTATAGGTGTTGAAAATAGGCAAATAACAGGTCATAAAGTGACTACAA
TATTTTAAATATATCGTCTCAATGTCTTTATAAATGAATGGAATCAATAT
TTGTGTTTGGAGAAACTGTCTAAAGTTGACACTCAAGAACTAATTGGGGA
CGACAGGGAATCGATGGATGAAGACAATACACATACACTCTCTCTCTCTC
TCTCTCTCTCTCTCTCACACACCCTCACCTGTAAGAGAGAGAGAGAGA

Query= MSMg01no100_c23.b1 MSMg01no100_c23.b1 CHROMAT_FILE:
MSMg01no100_c23.b1 PHD_FILE: MSMg01no100_c23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:57:58 2005
         (458 letters)



>mm_chr18_69352005_69352862
          Length = 858

 Score =  839 bits (434), Expect = 0.0
 Identities = 452/458 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   aggctcgatcgtgagactgcatcaaaggggacaaggatgttccacttgtccttttaaaaa 60
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 201 aggctcgatcgtgagactgcatcaaaggggacaaggatgctccacttgtccttttaaaaa 260

                                                                       
Query: 61  gcaccatgagaacatgaagctggtattggcagggagaggcagtttctgtgttgtaataac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcaccatgagaacatgaagctggtattggcagggagaggcagtttctgtgttgtaataac 320

                                                                       
Query: 121 tgctgccgtaggggagggagggtccaggaacaggtgaaaatagaattctccagaggcagg 180
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgctgccgtaggggagggaggatccaggaacaggtgaaaatagaattctccagaggcagg 380

                                                                       
Query: 181 tggcacgagacaagctgcccatgacctacttcttggactctctgatagagacttgtaagt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tggcacgagacaagctgcccatgacctacttcttggactctctgatagagacttgtaagt 440

                                                                       
Query: 241 atgagacacgccttctggtcctgaccagaaaaccagcagagtcatacagagtctgataaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 441 atgagacacgccttctggtcctgaccagaaaaccagcagagtcatacagagtcagaaaaa 500

                                                                       
Query: 301 tgctagaatcccactgagggaagccagtgtctgcagttaagagtacccgagagttccaat 360
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 501 tgctagaatcccactgagggaagccagtgtctgcagttaagagtaccagagagttccaat 560

                                                                       
Query: 361 aatccatagaggatgtagcaagatcactctgtgaatgagactgggtggtgtcaggcagcc 420
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aatccatagaggatgtaacaagatcactctgtgaatgagactgggtggtgtcaggcagcc 620

                                                 
Query: 421 tggagctccagctgaaggagcttacttgtaagtaacag 458
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tggagctccagctgaaggagcttacttgtaagtaacag 658


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 458
Length of database: 858
Length adjustment: 10
Effective length of query: 448
Effective length of database: 848
Effective search space:   379904
Effective search space used:   379904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no100_c23.g1 MSMg01no100_c23.g1 CHROMAT_FILE:
MSMg01no100_c23.g1 PHD_FILE: MSMg01no100_c23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:57:58 2005
         (505 letters)



>mm_chr18_69452407_69453311
          Length = 905

 Score =  930 bits (481), Expect = 0.0
 Identities = 499/505 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   tctcctgccactggtgaggcagattggaggaacccatttctccataagtgtatttggcta 60
           ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 705 tctcctgccactggtgaggcagattggaggaacccatttttccataagtgtatttgacta 646

                                                                       
Query: 61  aagaataagaattattttaaaacaccggtaagaatttttagttttctgggttttcatgga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 aagaataagaattattttaaaacaccggtaagaatttttagttttctgggttttcatgga 586

                                                                       
Query: 121 aagcaaccattgtaaatgaacttgtgaaacttgctggcattgaggtctgttggatcctgg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 aagcaaccattgtaaatgaacttgtgaaacttgctggcattgaggtctgttggatcctgg 526

                                                                       
Query: 181 agggtgtcaggctgtccctttccttatgcttggtggccttgagcatgaaccttgccctca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 agggtgtcaggctgtccctttccttatgcttggtggccttgagcatgaaccttgccctca 466

                                                                       
Query: 241 gatcaatctggtggttcgaactctgcacaaacactctgggaaaatagcattcccacctca 300
           || || ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 gagcagtctggtggttcgaactctgcacaaacactctgggaaaatagcattcccacctca 406

                                                                       
Query: 301 aggtcaactgcaagcacaaaccccatagttctatgccagaagaccttactctcaccccaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 aggtcaactgcaagcacaaaccccatagttctatgccagaagaccttactctcaccccaa 346

                                                                       
Query: 361 gggctttaaaacatttacaccagcattagaaggtgcttataggtgttgaaaataggcaaa 420
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 gggcttcaaaacatttacaccagcattagaaggtgcttataggtgttgaaaataggcaaa 286

                                                                       
Query: 421 taacaggtcataaagtgactacaatattttaaatatatcgtctcaatgtctttataaatg 480
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 285 taacaggtcataaagtgactacaatattttaaatatatcgtctcaatatctttataaatg 226

                                    
Query: 481 aatggaatcaatatttgtgtttgga 505
           |||||||||||||||||||||||||
Sbjct: 225 aatggaatcaatatttgtgtttgga 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 505
Length of database: 905
Length adjustment: 10
Effective length of query: 495
Effective length of database: 895
Effective search space:   443025
Effective search space used:   443025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)