Query= MSMg01no117_h16.b1 MSMg01no117_h16.b1 CHROMAT_FILE:
MSMg01no117_h16.b1 PHD_FILE: MSMg01no117_h16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:24:03 2005
(319 letters)
>mm_chr18_10456488_10457207
Length = 720
Score = 557 bits (288), Expect = e-163
Identities = 306/312 (98%), Gaps = 1/312 (0%)
Strand = Plus / Plus
Query: 8 tctgcttttctccttgagtagcaagtttatccatgggcttttatactgtaaacttgcttt 67
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 tctgcttttccccttgagtagcaagtttatccatgggcttttatactgtaaacttgcttt 267
Query: 68 gatcaaggtgtgctttctgtgtttcatgcctctcattcttaactggggagggggggg-tg 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 268 gatcaaggtgtgctttctgtgtttcatgcctctcattcttaactggggaggggggggatg 327
Query: 127 ttcctgggaacacagtctgtgtagtacttagtatgttggtagttagtatgttgttttgct 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 ttcctgggaacacagtctgtgtagtacttagtatgttggtagttagtatgttgttttgct 387
Query: 187 tttcatttgcaggagagaagatattgagggcgtctgtgggaagtagctggaacctatttc 246
||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 388 tttcatttgcaggagagaagaaattgagggggtctgtgggaagtagctggaacctatttc 447
Query: 247 cccaacttccttttcttgccctccctgttttcttacgcccaccccactaccctaacttcc 306
||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 448 cccaacttccttttcttgccctccctggttgcttacgcccaccccactaccctaacttcc 507
Query: 307 tatggaaaggga 318
||||||||||||
Sbjct: 508 tatggaaaggga 519
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 720
Length adjustment: 9
Effective length of query: 310
Effective length of database: 711
Effective search space: 220410
Effective search space used: 220410
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no117_h16.g1 MSMg01no117_h16.g1 CHROMAT_FILE:
MSMg01no117_h16.g1 PHD_FILE: MSMg01no117_h16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:24:03 2005
(570 letters)
>mm_chr18_10597096_10598065
Length = 970
Score = 758 bits (392), Expect = 0.0
Identities = 410/416 (98%)
Strand = Plus / Minus
Query: 155 tattcataagcacactgtagctgtcttcagacgcaccagaagaggttgtcagatttcatt 214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 970 tattcataagcacactgtagctgtcttcagacgcaccagaagaggttgtcagatttcatt 911
Query: 215 acgggtggttgtaagccaccatgtggttgctgttatttgaactcaggaccttcggaagag 274
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 910 acgggtggttgtaagccaccatgtggttgctgggatttgaactcaggaccttcggaagag 851
Query: 275 cagtcagtgttcttacccgctgagccatctcaccagccctatgtaattattttttaagat 334
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 850 cagtcagtgttcttacccgctgagccatctcaccagccctaagtaattattttttaagat 791
Query: 335 ctatttatttatttttaattcatgtacatgtgcccacgtgaacatgtgtgcacatattct 394
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 790 ctatttatttatttttaattcatgtacatgtacccacgtgaacatgtgtgcacatattct 731
Query: 395 tgcaggtgcacatagaggccagagaacattggatcctcttaaactggacttaaagatggt 454
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 tgcaggtgcatatagaggccagagaacattggatcctcttaaactggacttaaagatggt 671
Query: 455 cgtgagctacctaatgttgattctggaaaccaaacctgagtcctttgcacgaacaataaa 514
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 cgtgagctacctaatgtggattctggaaaccaaacctgagtcctttgcacgaacaataaa 611
Query: 515 cttagtcattgggccattttaaccattgcctttagtcctttcattttaatatcgta 570
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 cttagtcattgggccattttaaccattgcctttagtcctttcattttaatatcgta 555
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 570
Length of database: 970
Length adjustment: 10
Effective length of query: 560
Effective length of database: 960
Effective search space: 537600
Effective search space used: 537600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
