Query= MSMg01no118_d22.b1 MSMg01no118_d22.b1 CHROMAT_FILE:
MSMg01no118_d22.b1 PHD_FILE: MSMg01no118_d22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:25:02 2005
(362 letters)
>mm_chr18_81314636_81315398
Length = 763
Score = 474 bits (245), Expect = e-138
Identities = 320/361 (88%), Gaps = 37/361 (10%)
Strand = Plus / Plus
Query: 5 ggaattctcc-agcattcctctgggtaatggcttttccatgagtatctgttgggctgagg 63
|||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ggaattctccaagcattcctgtgggtaatggcttttccatgagtatctgttgggctgagg 264
Query: 64 aactccatttgtgtgatagagacagggctgtcaaagagcttgagaactggcaatccaatg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aactccatttgtgtgatagagacagggctgtcaaagagcttgagaactggcaatccaatg 324
Query: 124 tcaactggtcatccctaaaaacatatactcacaagcaacacttaatccactcaactggat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tcaactggtcatccctaaaaacatatactcacaagcaacacttaatccactcaactggat 384
Query: 184 gtatttgtgtacacacacacacacacacacacacacacacacacacacacacacacacca 243
|||||||||||||||||||||||||||||||||||||| ||||| ||| | ||||
Sbjct: 385 gtatttgtgtacacacacacacacacacacacacacac-cacacccac-c-----cacc- 436
Query: 244 cacacacaccacacacacacc-cacccacacacaccacacccacac-cacacatacacac 301
|||||||||||||| || ||||||||| ||| ||||| || |||||| |||||
Sbjct: 437 cacacacaccacac-----cctcacccacac-cac-acacc---actcacaca--cacac 484
Query: 302 acacatatatgtgtatatatatatgtgtgcgtgtttgtgtgtgtgtgtgtatacatatat 361
||| |||||||||||||||||| |||||||||||| |||||||||||
Sbjct: 485 acatatatatgtgtatatatat--------------gtgtgtgtgtgtatatacatatat 530
Query: 362 a 362
|
Sbjct: 531 a 531
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 56
Number of extensions: 11
Number of successful extensions: 11
Number of sequences better than 10.0: 1
Number of HSP's gapped: 8
Number of HSP's successfully gapped: 1
Length of query: 362
Length of database: 763
Length adjustment: 9
Effective length of query: 353
Effective length of database: 754
Effective search space: 266162
Effective search space used: 266162
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no118_d22.g1 MSMg01no118_d22.g1 CHROMAT_FILE:
MSMg01no118_d22.g1 PHD_FILE: MSMg01no118_d22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:25:02 2005
(160 letters)
>mm_chr18_81380944_81381503
Length = 560
Score = 248 bits (128), Expect = 2e-70
Identities = 149/156 (95%)
Strand = Plus / Minus
Query: 1 cctcaatgtctgttctgtcatagcggactgcagaacatccgtggcttatagtttcactcc 60
|||||||||||||||||||||| | || |||||||||||||||||||| |||||||||||
Sbjct: 330 cctcaatgtctgttctgtcataacagattgcagaacatccgtggcttacagtttcactcc 271
Query: 61 agttctgcctccgacttctccctgcctcctccaccattctggtttgtactatgcatctct 120
|||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 270 agttctgcctcccacttctccctgcctcctccatcattctggtttgtactatgcatctct 211
Query: 121 ttttgcttttttgtggtggtggtggtggtggtggtg 156
|||||||||| |||||||||||||||||||||||||
Sbjct: 210 ttttgcttttgtgtggtggtggtggtggtggtggtg 175
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 160
Length of database: 560
Length adjustment: 8
Effective length of query: 152
Effective length of database: 552
Effective search space: 83904
Effective search space used: 83904
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
