Query= MSMg01no121_f15.b1 MSMg01no121_f15.b1 CHROMAT_FILE:
MSMg01no121_f15.b1 PHD_FILE: MSMg01no121_f15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:29:06 2005
(188 letters)
>mm_chr18_57410322_57410909
Length = 588
Score = 308 bits (159), Expect = 2e-88
Identities = 183/195 (93%), Gaps = 8/195 (4%)
Strand = Plus / Minus
Query: 1 caatcatggataggtatgcacacctgggaaactcaagcagacggcagctttctagaggag 60
||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 caatcatggttaggtgtgcacacctgggaaactcaagcagacggcagctttctagaggag 245
Query: 61 acttttcctgtggtttttaaatcactgctataactatacacata--tata------aggt 112
||||||||||||||||||||||||||| |||||||||||||||| |||| ||||
Sbjct: 244 acttttcctgtggtttttaaatcactgttataactatacacatagttatacacataaggt 185
Query: 113 gcagtgtgatgactctgtgcataccaaacattttctatttaaatagacatcacggagtgg 172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 gcagtgtgatgactctgtgcataccaaacattttctatttaaatagacatcacggagtgg 125
Query: 173 ctatgactccctgct 187
||||||||| |||||
Sbjct: 124 ctatgactctctgct 110
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 188
Length of database: 588
Length adjustment: 8
Effective length of query: 180
Effective length of database: 580
Effective search space: 104400
Effective search space used: 104400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no121_f15.g1 MSMg01no121_f15.g1 CHROMAT_FILE:
MSMg01no121_f15.g1 PHD_FILE: MSMg01no121_f15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:29:06 2005
(129 letters)
>mm_chr18_57288598_57289126
Length = 529
Score = 207 bits (107), Expect = 2e-58
Identities = 122/127 (96%)
Strand = Plus / Plus
Query: 1 ttccctgctacacatgtcaccgttgcagacaccaacaaccatcttctctatgcctttcga 60
||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||
Sbjct: 201 ttccctgctacacatgtcaccattgcagacaccagcaaccatcttctctatgcctttcga 260
Query: 61 gagagtgagctcattatgcataatacataggtttatttggttgaaattgtaatagatttg 120
|||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagagtgagcgcattacgcagaatacataggtttatttggttgaaattgtaatagatttg 320
Query: 121 ttatgtc 127
|||||||
Sbjct: 321 ttatgtc 327
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 129
Length of database: 529
Length adjustment: 8
Effective length of query: 121
Effective length of database: 521
Effective search space: 63041
Effective search space used: 63041
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
