Query= MSMg01no124_g09.b1 MSMg01no124_g09.b1 CHROMAT_FILE:
MSMg01no124_g09.b1 PHD_FILE: MSMg01no124_g09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:35:27 2005
(526 letters)
>mm_chr18_71154458_71155383
Length = 926
Score = 928 bits (480), Expect = 0.0
Identities = 513/526 (97%), Gaps = 4/526 (0%)
Strand = Plus / Minus
Query: 1 cctggtgaaaacgaatatcatgacattctaccacttatgtcatttgtgtctttagtattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 cctggtgaaaacgaatatcatgacattctaccacttatgtcatttgtgtctttagtattt 465
Query: 61 tggttactgtctatcttctgagaaacaagaattttaatctttggaccccgatatgagtga 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 464 tggttactgtctatcttctgagaaacaagaattttaatctttggaccccaatatgagtga 405
Query: 121 gcaggaccctcctggtatgaaatggtatgaaaaggcaaggcaaactcttgcccttaccta 180
||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 404 gcaggaccctcctagtatgaaatggtatgaaaaggcaaagcaaactcttgcccttaccta 345
Query: 181 ttgtaattcaaaaaagagaacactaatgaatcagattaatgtgtagcatagacattgtct 240
|||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 ttgtaattcataaaagatagcactaatgaatcagattaatgtgtagcatagacattgtct 285
Query: 241 taagaatatggcttcttgtaatacctagactttcctcttaacttaaatgcattgcttctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 taagaatatggcttcttgtaatacctagactttcctcttaacttaaatgcattgcttctc 225
Query: 301 tcaatacagggctgtgcacacatgctcaccctgtctctctctcctctctaactttttttg 360
|||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||
Sbjct: 224 tcaatacagggctgtgcacacatgctcatcctgtctctc----ctctctaactctttttg 169
Query: 361 tcttccctcttcccccctttccctcacccctctttcctctttctggccttctcctcctct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 tcttccctcttcccccctttccctcacccctctttcctctttctggccttctcctcctct 109
Query: 421 ctcccagccaacttcagcctgtttagtactcttctaacttcttagttgacaccctcctta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 ctcccagccaacttcagcctgtttagtactcttctaacttcttagttgacaccctcctta 49
Query: 481 gatacctaatgagactcttattatgtcccattgataacattgcctt 526
||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 48 gatacctaatgagactcttattatgtctcattgataacattgcctt 3
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 526
Length of database: 926
Length adjustment: 10
Effective length of query: 516
Effective length of database: 916
Effective search space: 472656
Effective search space used: 472656
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no124_g09.g1 MSMg01no124_g09.g1 CHROMAT_FILE:
MSMg01no124_g09.g1 PHD_FILE: MSMg01no124_g09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:35:27 2005
(518 letters)
>mm_chr18_70992888_70993805
Length = 918
Score = 963 bits (498), Expect = 0.0
Identities = 513/518 (99%)
Strand = Plus / Plus
Query: 1 cattttataatatggttttcccagaagtgctattgctctgatccaactgactttgggaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cattttataatatggttttcccagaagtgctattgctctgatccaactgactttgggaga 260
Query: 61 caataaacatctcttcctcagagtaagtgatgggtcagggtcatcatttgagaagaacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caataaacatctcttcctcagagtaagtgatgggtcagggtcatcatttgagaagaacaa 320
Query: 121 attcacctcttctgctttttttcattcctttcatgaaatccctcggggcacattttgctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attcacctcttctgctttttttcattcctttcatgaaatccctcggggcacattttgctg 380
Query: 181 tactttcttggcttgctaatagatcgactctaaggtttcttaaaatgatggaccaatctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tactttcttggcttgctaatagatcgactctaaggtttcttaaaatgatggaccaatctt 440
Query: 241 ttactttctggcaatgaatgcacccctgctgtcgtctggcaatgatgctttctgagaggt 300
|| ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 441 tttctttctggctatgaatgcacccctgctgtcgtctggcaacgatgctttctgagaggt 500
Query: 301 gtcagggttatttatttaaccaacaactcacatctttaaagttgttcgatgagatggtta 360
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 501 gtcagggttatttatttaaccaacaactcagatctttaaagttgttcgatgagatggtta 560
Query: 361 tttcaaaaaaagacacagaaagagtcttctcacaaagtacgtttttattatttgttctga 420
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 561 tttcaaaaaaagacacagaaagagtcttctcacaaagcacgtttttattatttgttctga 620
Query: 421 tattgtgaggtattagatgtagggttatgagtactttcaatagatcactactgtagtaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tattgtgaggtattagatgtagggttatgagtactttcaatagatcactactgtagtaca 680
Query: 481 tcaagagctttcgattacttatatttatactttaatca 518
||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tcaagagctttcgattacttatatttatactttaatca 718
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 518
Length of database: 918
Length adjustment: 10
Effective length of query: 508
Effective length of database: 908
Effective search space: 461264
Effective search space used: 461264
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
