CAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCCTTTTATTGCCCATTTATAAGTAATAATGTATTTTCTAAGGGTGAC
ATAACCTCATTCACATTGAGGAGCTGATTTAATTGCTTCATAAAGAATTT
ATGCTATTATTTAAAAATAAGAACTCATAACTATAACAGCATTATTTTCC
CCTTTATGTTAAATACCACATGTTTGCTTAGGCCTAAAGAATTCACAAGA
ATGCTTTGACAAAACATTTCATTTCATGAACTCTGTGTTTGTGTAATTAT
ACGTCTCCAAAACTCACTTAACATTTTCTTGTTCTCCAGTTTGAGGGCTT
TAGTGAAGGGTAGGAAAGACTTCATATTCCATTTTGAATCTTCCAGTCCA
TTTTCTGTTTTTGCTGATGACCTCTGAAACATCACATTCACAGAGAAACA
ATACTCAAGAATGAAAAGCGAAGTGGTCTTTTGGTAGTGCTATTTTAGTT
TGATGTTGACATTTCAGGCTAAATCTCTTTTACTGAAAATTTATGTTTTT
CCTAGAACAAGTGTTTCTATACATTTCCAAAGGAGTGTTCCTCATCCAAA
TAAGCCTCCTTACTGTTCACAGACATTTTGCTTGGAAGTTAGTGATTTTA
CCTGTTGTGAGTCCTCAACATAATTAATTAACCCTCATACTATACTCCTG
TGCATGTTCCCTATGTATTTGTCTATATCAGATA

CATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTGATTGGATGAGGTGGAGTAGAGTTA
GAAGGAGCTGAGTCGCCATGAGTAGTGAAGAGGGTTGTTTTAGCCCTTGC
CATGAGTAGAAGTAATAGAAGAGAAGCTGTTGTAATAGGAGTTGTTTTAG
CCCTTGCCGTGAGTAGTAGAGTAAGAGAAGCTGTTGTAATAGGAGTAGTT
TAGCCCTTGCCCTAAGAGGATGCTCTGGGGAAGAGAGCTGTAAGAGAAAA
AACCCGAAGTAATGTTGCTATGTGAACCCAACTGACTTGGTGTCTGAGTC
ATTCTTGTCTCCCTGGCTGGAGACTGCGGAGACTGGAGACCGGGACAAGT
TATGAGCCAAGTGGATTTAACCAATATTGATAGAACATACCTTCTTTTTA
GTACCTTATAGTATCTTTTCAAAAAATTGGCCATATAATTAGACACAAAC
AAGCCTCAACTGATACAAGAAAATTGAAAGAATCCCATGCATTCTATCAG
ATCTAATACTAAGGCTGGTCTTAAACAAACAAACAAACAAACAAGCAAAC
AAAAACCAGGAAGCCCACATGGAAGGTAAACAACTCTCTACTCAATAATA
ACTTGGTCAGAGAAGAAGTAAAGAAAGAAATTAAAGACTTTTTGAATTTT
ATGAAAGTGAAGGTACAACATATCCAAACTTAA

Query= MSMg01no128_b20.b1 MSMg01no128_b20.b1 CHROMAT_FILE:
MSMg01no128_b20.b1 PHD_FILE: MSMg01no128_b20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:41:06 2005
         (680 letters)



>mm_chr18_18603702_18604781
          Length = 1080

 Score = 1301 bits (673), Expect = 0.0
 Identities = 676/677 (99%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattccttttattgcccatttataagtaataatgtattttctaagggtgacataacct 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 880 ggaattccttttattgcccatttataagtaataatgtattttctaagggtgacataacct 821

                                                                       
Query: 64  cattcacattgaggagctgatttaattgcttcataaagaatttatgctattatttaaaaa 123
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 820 cattcacattgaggagttgatttaattgcttcataaagaatttatgctattatttaaaaa 761

                                                                       
Query: 124 taagaactcataactataacagcattattttcccctttatgttaaataccacatgtttgc 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 760 taagaactcataactataacagcattattttcccctttatgttaaataccacatgtttgc 701

                                                                       
Query: 184 ttaggcctaaagaattcacaagaatgctttgacaaaacatttcatttcatgaactctgtg 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 ttaggcctaaagaattcacaagaatgctttgacaaaacatttcatttcatgaactctgtg 641

                                                                       
Query: 244 tttgtgtaattatacgtctccaaaactcacttaacattttcttgttctccagtttgaggg 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 tttgtgtaattatacgtctccaaaactcacttaacattttcttgttctccagtttgaggg 581

                                                                       
Query: 304 ctttagtgaagggtaggaaagacttcatattccattttgaatcttccagtccattttctg 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 ctttagtgaagggtaggaaagacttcatattccattttgaatcttccagtccattttctg 521

                                                                       
Query: 364 tttttgctgatgacctctgaaacatcacattcacagagaaacaatactcaagaatgaaaa 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 tttttgctgatgacctctgaaacatcacattcacagagaaacaatactcaagaatgaaaa 461

                                                                       
Query: 424 gcgaagtggtcttttggtagtgctattttagtttgatgttgacatttcaggctaaatctc 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 gcgaagtggtcttttggtagtgctattttagtttgatgttgacatttcaggctaaatctc 401

                                                                       
Query: 484 ttttactgaaaatttatgtttttcctagaacaagtgtttctatacatttccaaaggagtg 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 ttttactgaaaatttatgtttttcctagaacaagtgtttctatacatttccaaaggagtg 341

                                                                       
Query: 544 ttcctcatccaaataagcctccttactgttcacagacattttgcttggaagttagtgatt 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 ttcctcatccaaataagcctccttactgttcacagacattttgcttggaagttagtgatt 281

                                                                       
Query: 604 ttacctgttgtgagtcctcaacataattaattaaccctcatactatactcctgtgcatgt 663
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 ttacctgttgtgagtcctcaacataattaattaaccctcatactatactcctgtgcatgt 221

                            
Query: 664 tccctatgtatttgtct 680
           |||||||||||||||||
Sbjct: 220 tccctatgtatttgtct 204


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 680
Length of database: 1080
Length adjustment: 10
Effective length of query: 670
Effective length of database: 1070
Effective search space:   716900
Effective search space used:   716900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)