XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTTGTT
TATCCCCGAACTCCATTTTATAATGGGGTTATTTGATTTTCTGGAGTCCA
CCTTCTTGAGTTCCCTATATATATTGGATATTAGTAACCTATCTGATTTA
AGATAGGTAAAGATCCTTTCCCAAACTGTTGATGGCCTTTTTGTCTTATT
GACGGTGTCTTTTGCCTTACAGAAGCTTTGCAATTTCATGAGGTCCCATT
TGTCAATTCTCCATCTTACAGCACAAGCCATTGCTGTTCTATTCAGGAAT
TTTCCCCTCTGTCCATCTCTTCAAGGCTTTTGCTCACTTTCTCCTCTATA
AGTTTCAGTGTCTCCGGCCTTTATTTGGAGTTCATTAATCCACTTAGATT
TGACCTTAGTACAAGGACATAGGAATGGGTCAATTTGCATTCTTCTACAT
GATAACTGCTTGTTGTGCCAGCAGAATTTGTTGAAAATGCTGTCTTTTTT
CCACTGGATGGTTTTAGCTCCCTTGTCAAAGATCAAGTGTCCACAGGTGT
GTGGGTTCATTTCTGGGTCTTCAATTCTATTCCATTGGTCTACTTGTCTG
TTGCTATACCAGTACCATGCAGTTTTTATCACAATTGCTCTGTAGTACAG
CTTTAGGGTCAAGCACGGTGAATCCAACAGAGGTTCTTTTATCCTTGAGA
AGATTTTTTGCTATCTTACGCTTTTGTTATT

TGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXACTGGTAATTAATAATGAACATCTCACATAAGAGA
TGAGAAATTCACTTTCTTGAGAGTCTCAGTACAATAGTGTTTTAAGAAGG
CCAGAGTAATGCAAATTACTATGTATAGATTTTTATTTTGGTAGAGAGTT
GTTAGAAAATTGAAATATAACCCCCTCCATCCTTTACAATGGTTTACAGT
ACACTGGCCAGACCAGTGTGTGGACCTTATCCAAGAAAAGCTTCTGGGCT
TATTTCAGTAGATCATCTGGCAACACAAATAACTAGTCTCATTATTCCAA
TATTTTTGACAACCAATCAAAGTCTTTGGTCTTTGGGTACAGAAATTTAT
CTTAATTCATGTTGGCTTAAGTCTCTTGTCATTTTTGATTCTCAATATAA
TAATGCAGATATCTTGAGTAAGAAATAGCTGTAGGAGAACAGAAGTTCTA
TCTACTCAGAAAAAGTGAGATTTCAACTTCATGTGATGTTATTTGGCAAA
AATGTAGGCAAGAAATTCCTATGAGTTATGATTCTGCCTACTGAATCCAC
TTGACTTTGAGTTCCCTCTTAAGTAGGAATGATAAAACTTACCATAGTCA
GTGCAAACAGGACTAACATTGTCTCTTTGCCTTTTACACTTATTTTCCAA
TAGCACAGCGCATCTCTTGAGGCTGGACATTN

Query= MSMg01no130_d14.g1 MSMg01no130_d14.g1 CHROMAT_FILE:
MSMg01no130_d14.g1 PHD_FILE: MSMg01no130_d14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:43:55 2005
         (622 letters)



>mm_chr18_88756044_88757065
          Length = 1022

 Score =  880 bits (455), Expect = 0.0
 Identities = 500/521 (95%), Gaps = 11/521 (2%)
 Strand = Plus / Minus

                                                                       
Query: 1   actggtaattaataatgaacatctcacataagagatgagaaattcactttcttgagagtc 60
           |||||||| ||||||||| ||||||||||||||||||| |||||||| |||| |||||||
Sbjct: 514 actggtaagtaataatgaccatctcacataagagatgacaaattcaccttctagagagtc 455

                                                                       
Query: 61  tcagtacaatagtgttttaagaaggccagagtaatgcaaattactatgtatagattttta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 tcagtacaatagtgttttaagaaggccagagtaatgcaaattactatgtatagattttta 395

                                                                       
Query: 121 ttttggtagagagttgttagaaaattgaaatataaccccctccatcctttacaatggttt 180
           |||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 394 tttttgtagagaggtgttagaaaattgaaatataaacccctccatcctttacaatggttt 335

                                                                       
Query: 181 acagtacactggccagaccagtgtgtggaccttatccaagaaaagcttctgggcttattt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 acagtacactggccagaccagtgtgtggaccttatccaagaaaagcttctgggcttattt 275

                                                                       
Query: 241 cagtagatcatctggcaacacaaataactagtctcattattccaatatttttgacaacca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 cagtagatcatctggcaacacaaataactagtctcattattccaatatttttgacaacca 215

                                                                       
Query: 301 atcaaagtctttggtctttgggtacagaaatttatcttaattcatgttggcttaagtctc 360
           ||||||       |||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 214 atcaaa-------gtctttgggtacagaaatttatcttaattcatgttggcttaagtcta 162

                                                                       
Query: 361 ttgtcatttttgattctcaatataataatgcagatatcttgagtaagaaatagctgtagg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 ttgtcatttttgattctcaatataataatgcagatatcttgagtaagaaatagctgtagg 102

                                                                       
Query: 421 agaacagaagttctatctactcagaaa----aagtgagatttcaacttcatgtgatgtta 476
           |||||| ||||||||||||||||||||    |||||||||||||||||||||||||||||
Sbjct: 101 agaacaaaagttctatctactcagaaaaagtaagtgagatttcaacttcatgtgatgtta 42

                                                    
Query: 477 tttggcaaaaatgtaggcaagaaattcctatgagttatgat 517
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 41  tttggcaaaaatgtaggcaagaaattcctatgagttatgat 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 622
Length of database: 1022
Length adjustment: 10
Effective length of query: 612
Effective length of database: 1012
Effective search space:   619344
Effective search space used:   619344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)