Query= MSMg01no135_h21.b1 MSMg01no135_h21.b1 CHROMAT_FILE:
MSMg01no135_h21.b1 PHD_FILE: MSMg01no135_h21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:51:38 2005
(375 letters)
>mm_chr18_21403824_21404599
Length = 776
Score = 640 bits (331), Expect = 0.0
Identities = 361/371 (97%), Gaps = 1/371 (0%)
Strand = Plus / Minus
Query: 5 gaattctttcacatttgccggaaacagggatctcccaagcttttcgtcaaagtagaattt 64
|||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct: 575 gaattctttcacatttgcaggaaacagggatctcccaagcttttcgtcaaactagaattt 516
Query: 65 ttgcactgcaggttcattgccaaagtgagatgcccaggaggaactgagcagaatcatggg 124
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 515 ttgcactgcaggttcattgccaaaatgagatgcccaggaggaactgagcagaatcatggg 456
Query: 125 tgcttattaaatggagtgtgggtatggagtggccttatcccttgttgtgatgtcattatg 184
||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 455 tgcttattaaatgcagtgtgggtatggagtggccttatccctggttgtgatgtcattatg 396
Query: 185 cagcactgtaaattattacaatcctgtagaaaaggtatcatctctgtgtttttcatgat- 243
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 395 cagcactgtaaattattacaatcctgtagaaaaggtatcatctctgtatttttcatgatg 336
Query: 244 tttttttggcccaggtttcttctgcttgccccaaccctggcctcaaattctagtactgag 303
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 335 tttttttggcccaggtttcttctgtttgccccaaccctggcctcaaattctagtactgag 276
Query: 304 ttctccttggagcctgagatggatgctactgggggagtgatcaagttccacctctcagaa 363
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 275 ttctccttggagcctgagatggatgctactgggggagtgatcaaattccacctctcagaa 216
Query: 364 cgaataaagaa 374
||||||||||
Sbjct: 215 agaataaagaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 375
Length of database: 776
Length adjustment: 9
Effective length of query: 366
Effective length of database: 767
Effective search space: 280722
Effective search space used: 280722
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no135_h21.g1 MSMg01no135_h21.g1 CHROMAT_FILE:
MSMg01no135_h21.g1 PHD_FILE: MSMg01no135_h21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:51:38 2005
(387 letters)
>mm_chr18_21250044_21250825
Length = 782
Score = 661 bits (342), Expect = 0.0
Identities = 375/392 (95%), Gaps = 15/392 (3%)
Strand = Plus / Plus
Query: 1 tgggcaacatagaggaggttgatggctaaaagaaaccaaagtatggagtggatgatggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 tgggcaacatagaggaggttgatggctaaaagaaaccaaagtatggagt--atgatggaa 258
Query: 61 ggatcagcctcagggaggcttgctctgtccctaaagaaacactcttggcacctctcattt 120
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 259 ggatcagcctcagggaggcttgctctgtccctaaacaaacactcttggcacctctcattt 318
Query: 121 tccctcactgtggctcagttttaccaaagtgacattcaaatggaaaaaaagattctatct 180
|||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 319 tccctcactgtggctcagttttaccaaagtgacattcaaaaggaaaaaa-gattctatct 377
Query: 181 aatttcctgcttaaaaaataaatcccataaaggcctctgctgtgatatgaaataaatgtc 240
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 aatttcctgcttaaaaa-taaatcccataaaggcctctgctgtgatatgaaataaatgtc 436
Query: 241 atagtgggagctctgtctgtgggaagggagagtccacattttacatcaaccatgtgtgng 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 437 atagtgggagctctgtctgtgggaagggagagtccacattttacatcaaccatgtgtg-g 495
Query: 301 gagaggtgggccaactgcccacatactaaagcagatggggaaggaa-----gcccccaag 355
|||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 496 gagaggtgggccaactgcccacatactaaagcagatggggaaggaatggttg-----aag 550
Query: 356 actgcattactctcctctttgttatgatgaag 387
||||||||||||||||||||||||||||||||
Sbjct: 551 actgcattactctcctctttgttatgatgaag 582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 6
Number of successful extensions: 6
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 387
Length of database: 782
Length adjustment: 9
Effective length of query: 378
Effective length of database: 773
Effective search space: 292194
Effective search space used: 292194
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
