CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCATTAATGGCTCGTTCTAAAGCTAATATAGTATTATGAAGTACACT
AACTCATACCTGTTATTTTGAATTCCCTCTCCTATGGTAAAGAGATTAGC
TATAATGACTATTATCAGACTTATGGAGGCTGTTGTTGGTGCTAGTAATT
GCTATTATACTTAAGGCTAAGTTAATTTATATAAACAATAACAGTTAAGC
TGTCTGATGCAAACATAGTTTAAATAATGAATTAAGAGACATATTAGCAA
AAGAGAGAGAGAGAGAGAGAGACATATTATCATGGAAACTGTAGAAACTA
ATATGGTCACAATATGGGCTGACAGCATATTTAACTGACCCACTGATAGA
ACAGGTTTTAATATATAGCACAAAGACATTTGTTTTTTTAAAGAATAGAG
ATCATCCTGAAAATCTAGAAATACTTAAAGTAACCTCTGTGATTTACAGT
ACTGATGAAACTCCTTATTTGACCTTCTGTATATATGGAGGAATATTTAA
CATAATTGTAGGTAAAGAAATATGTTACAATGTTGAAGTTAAAGAAGAAA
ATTGTGTTTAGTACTCTATTAGCACTTTCAGTTTCCATCTGCCTCCCTGG
AGCTGACCCTCTGCCTCACAACAATCCTGCCCTACACAGAGATAGCTTGT
CCCCCAGGAGTGCTGACACACCTAAGCTCACAGGTGAGAG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXCAAGCTCAGGGTAGGCTTCAAGGATTATCTTGGA
CATTGGTAAAGGTCAGGGAGTAAAATTCAACCTGATTTAAGTATTTGTAA
AATCATTACTTGGAATCACCTATAATACAAGAAAGCACACAGATCCATAC
ACCAGACTAACATAGGGACAAGATTTGAGTATACGGGCTATGGGAATGCC
AAGGTTCCAGGAGGCTAAGTTTCCATGAAAGTCTTTACCTCATGACTGCT
TCCAGGCTTTTAGGTCTAACAAGCAGACTTCACTGGAGTGGATGTAGCAG
TTGATGCCTGTTTTGTAACTGATTATATGACATCCTTTATTGACCAAATC
AAGAACCAACTAAAGAACCACACTTTAGTATCAGCACCTCTCCCTACATA
GGCCAAAAAGGTTTTCTCCATTTAATATGATATTTGATATTTGCTTGGTA
TATATCACTTTTATTATGTTTTGGTATGCACCTAGTATCCCTAATCTAAG
ACATTTAACATTAAGGGGTATTGGATTTTGTCAAAGGCTTTTCCAGCATC
TAATGAAATGATCATGTGATTTTTTTCTGTTTATATGGGGAATTACACTG
ATAGATTTTCATATATTGAACCATCCTTGTATCCCTCTGATGAAGCCAAT
TAATTATTATGGATGGTGA

Query= MSMg01no135_p07.b1 MSMg01no135_p07.b1 CHROMAT_FILE:
MSMg01no135_p07.b1 PHD_FILE: MSMg01no135_p07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:52:11 2005
         (668 letters)



>mm_chr18_7979831_7980898
          Length = 1068

 Score = 1170 bits (605), Expect = 0.0
 Identities = 651/667 (97%), Gaps = 2/667 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcattaatggctcgttctaaagctaatatagtattatgaagtacactaactcata 63
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 ggaattcattaatggctagttctaaagctaatatagtattatgaagtacactaactcata 261

                                                                       
Query: 64  cctgttattttgaattccctctcctatggtaaagagattagctataatgactattatcag 123
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 262 cctgttattttgaattccctctcctatggtaaagagattagctataatggctattatcag 321

                                                                       
Query: 124 acttatggaggctgttgttggtgctagtaattgctattatacttaaggctaagttaattt 183
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 322 acttatggaggctgttgttggtgctaataattgctattatacttaaggctaagttaattt 381

                                                                       
Query: 184 atataaacaataacagttaagctgtctgatgcaaacatagtttaaataatgaattaagag 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 atataaacaataacagttaagctgtctgatgcaaacatagtttaaataatgaattaagag 441

                                                                       
Query: 244 acatattagc--aaaagagagagagagagagagagacatattatcatggaaactgtagaa 301
           ||||| ||||  |||| | | | |||||||||||||||||||| ||||||||||||||||
Sbjct: 442 acatactagcaaaaaaaaaaaaaagagagagagagacatattagcatggaaactgtagaa 501

                                                                       
Query: 302 actaatatggtcacaatatgggctgacagcatatttaactgacccactgatagaacaggt 361
           |||||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 502 actaatatgaccacaatatgggctgacagcatatttaactgacccgctgatagaacaggt 561

                                                                       
Query: 362 tttaatatatagcacaaagacatttgtttttttaaagaatagagatcatcctgaaaatct 421
           |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||
Sbjct: 562 tttaatatatagcacaaagacatttggttttttaaagaatagagaccatcctgaaaatct 621

                                                                       
Query: 422 agaaatacttaaagtaacctctgtgatttacagtactgatgaaactccttatttgacctt 481
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 agaaatacttaaagtaacctctgtgatttacagtactgatgaaactccttatttgacctt 681

                                                                       
Query: 482 ctgtatatatggaggaatatttaacataattgtaggtaaagaaatatgttacaatgttga 541
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 ctgtatatatggaggaatatttaacataattgtaggtaaagaaatatgttacaatgttga 741

                                                                       
Query: 542 agttaaagaagaaaattgtgtttagtactctattagcactttcagtttccatctgcctcc 601
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 agttaaagaagaaaattgtgtttagtactctattagcactttcagtttccatctgcctcc 801

                                                                       
Query: 602 ctggagctgaccctctgcctcacaacaatcctgccctacacagagatagcttgtccccca 661
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 ctggagctgaccctctgcctcacaacaatcctgccctacacagagatagcttgtccccca 861

                  
Query: 662 ggagtgc 668
           |||||||
Sbjct: 862 ggagtgc 868


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 668
Length of database: 1068
Length adjustment: 10
Effective length of query: 658
Effective length of database: 1058
Effective search space:   696164
Effective search space used:   696164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)