Query= MSMg01no153_j22.b1 MSMg01no153_j22.b1 CHROMAT_FILE:
MSMg01no153_j22.b1 PHD_FILE: MSMg01no153_j22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:18:02 2005
(334 letters)
>mm_chr18_82835238_82835970
Length = 733
Score = 621 bits (321), Expect = 0.0
Identities = 327/329 (99%), Gaps = 1/329 (0%)
Strand = Plus / Minus
Query: 1 tttccttttaaatctttaacacatgaaatagtagtaaggtactacataactttgtctcag 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 tttccttttaaatcgttaacacatgaaatagtagtaaggtactacataactttgtctcag 469
Query: 61 aagaacgcatggggccattaataattgttcttgtaagttgcttttgagtagagttgatac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 aagaacgcatggggccattaataattgttcttgtaagttgcttttgagtagagttgatac 409
Query: 121 ttaggagtagttgtgaatttgtgtagcacatatttcagaaatacctctaattgagggccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 ttaggagtagttgtgaatttgtgtagcacatatttcagaaatacctctaattgagggccc 349
Query: 181 catgttaggagaactgcagtgtgtacagtgggacttgtcctgtgatgggttactctagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 catgttaggagaactgcagtgtgtacagtgggacttgtcctgtgatgggttactctagaa 289
Query: 241 agggcctctaaagatgcgttttaaagtgttacccaatcctgtgaaatgtccatagcctta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 agggcctctaaagatgcgttttaaagtgttacccaatcctgtgaaatgtccatagcctta 229
Query: 301 aatttgtttttttttgggggtggggtggg 329
||||||||||||||||||| |||||||||
Sbjct: 228 aatttgtttttttttgggg-tggggtggg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 334
Length of database: 733
Length adjustment: 9
Effective length of query: 325
Effective length of database: 724
Effective search space: 235300
Effective search space used: 235300
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no153_j22.g1 MSMg01no153_j22.g1 CHROMAT_FILE:
MSMg01no153_j22.g1 PHD_FILE: MSMg01no153_j22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:18:02 2005
(493 letters)
>mm_chr18_82700872_82701764
Length = 893
Score = 899 bits (465), Expect = 0.0
Identities = 486/493 (98%)
Strand = Plus / Plus
Query: 1 tgaagtggacagaacaggccttcaggttccataagctttcctggggtcttcattcagatc 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgaagtggacagaacacgccttcaggttccataagctttcctggggtcttcattcagatc 260
Query: 61 caaacacacagcccagcaggtgtcccctcccggacctgctgtttccctagactaagagtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caaacacacagcccagcaggtgtcccctcccggacctgctgtttccctagactaagagtg 320
Query: 121 gcaagcacttccctgggagtctttgagatggtggtactaataaataaatccataatggtt 180
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 321 gcaagcacttccctgggagtctttgagatggtggtactgataaataaatccataatggtt 380
Query: 181 tttccctccaaggaaatcctgtcagtgacaacgccatctctttgctgagagagtgcagct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttccctccaaggaaatcctgtcagtgacaacgccatctctttgctgagagagtgcagct 440
Query: 241 tttcacctaattgaaaggatctggcacacactcacactctcgagctggtgaactcacgtg 300
||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttcacccaagtgaaaggatctggcacacactcacactctcgagctggtgaactcacgtg 500
Query: 301 ccacacgcagtccacctccagccccactggctgttcccatggcacccgcactcaaggttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 501 ccacacgcagtccacctccagccccactggctgttcccatggcacccgcactcaaggctc 560
Query: 361 gaaactgcactgcagggatgtgacatcatctgtactggcactggcctttaactggcacgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gaaactgcactgcagggatgtgacatcatctgtactggcactggcctttaactggcacgg 620
Query: 421 ggaaggtcagccgccactgtggcagagggaaagaggcttcatagtccctccctctggcgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 621 ggaaggtcagccgccactgtggcagagggaaagaggcttcatagtccctccctctggtgg 680
Query: 481 tttgtgggtagct 493
|| ||||||||||
Sbjct: 681 ttcgtgggtagct 693
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 493
Length of database: 893
Length adjustment: 10
Effective length of query: 483
Effective length of database: 883
Effective search space: 426489
Effective search space used: 426489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
