Query= MSMg01no154_a08.b1 MSMg01no154_a08.b1 CHROMAT_FILE:
MSMg01no154_a08.b1 PHD_FILE: MSMg01no154_a08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:18:32 2005
(510 letters)
>mm_chr18_73285306_73286211
Length = 906
Score = 893 bits (462), Expect = 0.0
Identities = 494/506 (97%), Gaps = 4/506 (0%)
Strand = Plus / Minus
Query: 5 gaattccatgaatccaccacaggaatatctcttttgtgaaccgaggttgggagacatctg 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 gaattccatgaatccatcacaggaatatctcttttgtgaaccgaggttgggagacatctg 647
Query: 65 ggaacacaagagccatcctatagcttgtctacagtacacatcacacgtgagcaggctctt 124
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 ggaacacaagagccgtcctatagcttgtctacagtacacatcacacgtgagcaggctctt 587
Query: 125 cttggtgtttggctaggtcaggatccatgccagcatctgcagatctggaggtttcatgta 184
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 586 cttggtgtttggctaggtcaggatccatgccagcatctgcagatct---ggtttcatgta 530
Query: 185 aatcatgtaaaccaaggaaatcaaacctggctgaagcgttctgctgagctacctacatcc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 aatcatgtaaaccaaggaaatcaaacctggctgaagcgttctgctgagctacctacatcc 470
Query: 245 actgtcaaatgaaatgactccacgatctctttcgaaagcgtgattgttctcggcagtatt 304
||||||||| |||| ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 469 actgtcaaacgaaacgactccacgatctcttttgaaagcgtgattgttctcggcagtatt 410
Query: 305 ctgcaggccccagaagatcatggtggtagagttggtttctggaaatccttccacacacaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 ctgcaggccccagaagatcatggtggtagagttggtttctggaaatccttccacacacaa 350
Query: 365 tgtgctagactgacattttactcacaagcagactggatttgaagaaactatcgaagcctt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 349 tgtgctagactgacattttactcacaagcagactggatttgaagaaactatcg-agcctt 291
Query: 425 tctgtaagagtccacattggcatcattaaaaacagctacttgtgctgttttggggtagat 484
|| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 290 tcggtaagagtccacattggcatcattaaaaacagctacttgtgctgttttgaggtagat 231
Query: 485 tttattttatctagacctgtataatg 510
|||||||||||||||| |||||||||
Sbjct: 230 tttattttatctagacttgtataatg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 510
Length of database: 906
Length adjustment: 10
Effective length of query: 500
Effective length of database: 896
Effective search space: 448000
Effective search space used: 448000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no154_a08.g1 MSMg01no154_a08.g1 CHROMAT_FILE:
MSMg01no154_a08.g1 PHD_FILE: MSMg01no154_a08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:18:32 2005
(522 letters)
>mm_chr18_73131516_73132437
Length = 922
Score = 986 bits (510), Expect = 0.0
Identities = 519/522 (99%)
Strand = Plus / Plus
Query: 1 catacctcatgaaatcagtttcagaattgcctatggcacaagttggagaaacatgagaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catacctcatgaaatcagtttcagaattgcctatggcacaagttggagaaacatgagaaa 260
Query: 61 atcctcctgctagtaacatttcaaattgtcaggcagagattaggccgtatctgagtaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atcctcctgctagtaacatttcaaattgtcaggcagagattaggccgtatctgagtaaaa 320
Query: 121 caagggcattggtgaggaagaaagaactatgtactatttaaaacatgtccatcgttttca 180
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caggggcattggtgaggaagaaagaactatgtactatttaaaacatgtccatcgttttca 380
Query: 181 ttaaataattgggatggaaaaacaaatacaaaggttgaacagcaaaaaatgtcttcacag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttaaataattgggatggaaaaacaaatacaaaggttgaacagcaaaaaatgtcttcacag 440
Query: 241 tagttcctagaaaaaaaataatttgagatttttcttttaaactcagagattgcagaaacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tagttcctagaaaaaaaataatttgagatttttcttttaaactcagagattgcagaaacc 500
Query: 301 aaaatcttatttatctctcttaaagcaaatgcaattttcatatagcattagtaggaaagt 360
||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 501 aaaatattatttatctctcttaaagcaaatgcaattttcatatagcattagtaggagagt 560
Query: 361 cttggtatccagtttgaggatgcattgcttgttatctacccctagctccactctcatgca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cttggtatccagtttgaggatgcattgcttgttatctacccctagctccactctcatgca 620
Query: 421 catacagcagccctgaatatccagccctgtgccccttcatcacgctacagctaaattatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 catacagcagccctgaatatccagccctgtgccccttcatcacgctacagctaaattatt 680
Query: 481 cagtttgtccaataaacatttgactaatcagagcatgtccag 522
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cagtttgtccaataaacatttgactaatcagagcatgtccag 722
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 522
Length of database: 922
Length adjustment: 10
Effective length of query: 512
Effective length of database: 912
Effective search space: 466944
Effective search space used: 466944
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
