TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTTCTATTTCCTTATGGGCTATGGGCCTGTTTAGATACTTTACCTAC
TCTTGATTTAACCTTGGTATGTGGTATATGTCTAGAAAATTATCCATTTC
ACCTAGATTTTCTAGTTTTGTTGATTATAGGCTTTTGTAGTAGGATCTTA
TGATGATTTTATAATTTCCTCCATGTCTGTTGTTAAACCTCCATTTTCAT
TTCTGATTTTGTTAATTTGGTTACTGCCTCTGGGCCCTTTTGTTAGTTTG
GCTAGGGATTTATCTACCTTGTTGATTCTCTCAAAGAATCATCTCCTGGT
TTGGGTGATTCTTTGTATAGTTCTTTTTGTTTCCACTTGGTTGATTTCAG
TCCTGAGTTTGACTATTTCCTGCTGTCTATTCCTCTTGGGTGTGTTTGCT
TCTTTTTGTTCTAGAGCTCTCAGGTGTGCTGTGAAATTGCTAGTGTAAGA
TCTTCCCAGTTCCTTTACCAGGGTGCTTAGTGCTATGAATTTTCCTCTTA
GCACTGCTTTCATTGTGTTCCATAAGTTTGGTTATGATGTGTCAACATTT
TCATTAAATTCCAGGAAGTCTTTATTTTCTTTCTTTATTTCTTCCTTGAC
CAAGTTATCATTGAATATAGAGTTGTTCCGTTTCCCTATATATATGGGAA
TCCTGT

CAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXAGTCATCTTCAGCTCCTTTATAGTTGAT
ATCAGCCTGTAATACAGGACATTTCAATTTTTTATGACATGAACTAAAAA
AAGATACTTAAAGTGTTTATATGAAAATTATGAGGGATGTATAGAACTTT
TAAATAAATAAGATTTTTATTTACACATATAAATTAATGCTAATGTTTTA
AATGACCTGTGACAGTTTAGATTTTCATGAGCATTCAAAAATAATGCTTG
TCTACATATAATGATTAATTACAAATGAGTATATTTCCTTATATTACCTG
GAATTTATTTGTGTTTTTTAAGGTTTACAAAGCAATTCTATATTTTCTTT
TTTTGCATGATTTTTTATTAGATATTTTCTTTATATACATTTCAAATGCT
ATCCCAAAAGTTCCCTATACCTTCCCCCGCCCTGATCCCCTACCCACCCA
CTCCCACTTCTTGGCCCTGGTATTCCCCTGTACTGGGGCATATAAAGTTT
GCAATAGCAAGGGGCGTCTCTTCCCAGTGATGGACAACTAGGCCATCTTC
TGCTACATATGCAGCTAGAGACACGAGCTCTGGGGCTACTGGTTAGTTCA
TATTGCTGTTCCACTTATAGGGCCGCAGACCCCTTCAGCTCCTTGGGTGC
TTTCTC

Query= MSMg01no154_n06.g1 MSMg01no154_n06.g1 CHROMAT_FILE:
MSMg01no154_n06.g1 PHD_FILE: MSMg01no154_n06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:19:34 2005
         (550 letters)



>mm_chr18_90297453_90298402
          Length = 950

 Score =  975 bits (504), Expect = 0.0
 Identities = 538/552 (97%), Gaps = 7/552 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   agtcatcttcagctcctttatagttgatatcagcctgtaatacaggacatttcaattttt 60
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 agtcatcttcagctcctttatagttgatatcagcctgtaatacaggagatttcaattttt 260

                                                                       
Query: 61  tatgacatga-actaaaaaaagatacttaaagtgtttatatgaaaattatgagggatgta 119
           |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tatgacat-atactaaaaaaagatacttaaagtgtttatatgaaaattatgagggatgta 319

                                                                       
Query: 120 tagaacttttaaataaataagatttttatttacacatataaattaatgctaatgttttaa 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tagaacttttaaataaataagatttttatttacacatataaattaatgctaatgttttaa 379

                                                                       
Query: 180 atgacctgtgacagtttagattttcatgagcattcaaaaataatgcttgtctacatataa 239
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 380 atgacctgtgacagtttagattttcatgagtattcaaaaataatgcttgtctacatataa 439

                                                                       
Query: 240 tgattaattacaaatgagtatatttccttatattacctggaatttatttgtgttttttaa 299
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 440 tgattaattacaaatgagtatatttccttatattacctggaatttatttgtgttttttga 499

                                                                       
Query: 300 ggtttacaaagcaattctatattttcttttttt-----gcatgattttttattagatatt 354
           |||||||||||||||||||||||||||||||||     ||||||||||||||||||||||
Sbjct: 500 ggtttacaaagcaattctatattttcttttttttttttgcatgattttttattagatatt 559

                                                                       
Query: 355 ttctttatatacatttcaaatgctatcccaaaagttccctataccttcccccgccctgat 414
           ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct: 560 ttctttatatacatttcaaatgctatctcgaaagttccctataccttcccccgccctgat 619

                                                                       
Query: 415 cccctacccacccactcccacttcttggccctggtattcccctgtactggggcatataaa 474
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 620 cccctacccacccactcccacttcttggccctggcattcccctgtactggggcatataaa 679

                                                                       
Query: 475 gtttgcaatagcaaggggcgtctcttcccagtgatggacaactaggccatcttctgctac 534
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 gtttgcaatagcaagaggcgtctcttcccagtgatggacaactaggccatcttctgctac 739

                       
Query: 535 atatgcagctag 546
           ||||||||||||
Sbjct: 740 atatgcagctag 751


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 550
Length of database: 950
Length adjustment: 10
Effective length of query: 540
Effective length of database: 940
Effective search space:   507600
Effective search space used:   507600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)