Query= MSMg01no155_g05.b1 MSMg01no155_g05.b1 CHROMAT_FILE:
MSMg01no155_g05.b1 PHD_FILE: MSMg01no155_g05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:17 2005
(374 letters)
>mm_chr18_42511756_42512527
Length = 772
Score = 613 bits (317), Expect = e-180
Identities = 356/371 (95%), Gaps = 6/371 (1%)
Strand = Plus / Plus
Query: 6 ggaattctggaata--tttccaattttctcctttttttccccactatctgatttaatacc 63
|||||||||||||| ||| |||||||||| ||| || |||||||||| |||||||||
Sbjct: 206 ggaattctggaataacttt--aattttctccctttctt--ccactatctggtttaatacc 261
Query: 64 ttaagactgcctgcagatattgctgtaatggatgccattctagatgttgctttttagaag 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ttaagactgcctgcagatattgctgtaatggatgccattctagatgttgctttttagaag 321
Query: 124 tgatgatgtcgagaggccaaatcttttttaagttcagactccattttagagaacctgacc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 tgatgatgtcgagaggccaaatcttttttaagttcagactccattttagagaacctgacc 381
Query: 184 caagtttgaactcaggaaaactaacagtctggtacctagcattaatttccaagttgcttc 243
||||||||||||||||||||| ||||| |||||||||||||||| |||||||||||| ||
Sbjct: 382 caagtttgaactcaggaaaacgaacaggctggtacctagcattagtttccaagttgcctc 441
Query: 244 ccaacaaaacccgagcctagttccagtctctaggctaatcctcaacaagaccacatttcc 303
|||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 442 ccaacaaaacccgagcctagtttcagtctctaggctaatcctcaacaagaccgcatttcc 501
Query: 304 aggttattcccccaacaagcctgcacccccaggttacaagcctatcccctgactaatgac 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 aggttattcccccaacaagcctgcacccccaggttacaagcctatcccctgactaatgac 561
Query: 364 tactaatacag 374
|||||||||||
Sbjct: 562 tactaatacag 572
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 374
Length of database: 772
Length adjustment: 9
Effective length of query: 365
Effective length of database: 763
Effective search space: 278495
Effective search space used: 278495
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no155_g05.g1 MSMg01no155_g05.g1 CHROMAT_FILE:
MSMg01no155_g05.g1 PHD_FILE: MSMg01no155_g05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:17 2005
(314 letters)
>mm_chr18_42673989_42674704
Length = 716
Score = 569 bits (294), Expect = e-166
Identities = 310/316 (98%), Gaps = 2/316 (0%)
Strand = Plus / Minus
Query: 1 caggctgcctggtctacagagcaagttccaggacagccaaggctacattcacagagaaac 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 690 caggctgcctggtctacagagcaagttccagaacagccaaggctacattcacagagaaac 631
Query: 61 cctgtcttggtgagaagaaaggtaggcaggcaggccggccttaatcttagatatcctttt 120
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 630 cctgtcttggtgagaagaaaggcaggcaggcaggccggccttaatcttagatatcctttt 571
Query: 121 gggtcagtcttcttcttcaaataaaaatctatattaaatatttctttaaaatttcatctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 gggtcagtcttcttcttcaaataaaaatctatattaaatatttctttaaaatttcatctt 511
Query: 181 cctgcttccaactcaaaatttggccagca--tttggcctctataaccattaagtcatacc 238
||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||
Sbjct: 510 cctgcttccaactcaaaatttggccagcatttttggcctctagaaccattaagccatacc 451
Query: 239 agctctgttctttatcaggctagttacataatttccaagtctaaatttcctaccatgtaa 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 agctctgttctttatcaggctagttacataatttccaagtctaaatttcctaccatgtaa 391
Query: 299 atgaatgaagatttca 314
||||||||||||||||
Sbjct: 390 atgaatgaagatttca 375
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 716
Length adjustment: 9
Effective length of query: 305
Effective length of database: 707
Effective search space: 215635
Effective search space used: 215635
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
