Query= MSMg01no160_c11.b1 MSMg01no160_c11.b1 CHROMAT_FILE:
MSMg01no160_c11.b1 PHD_FILE: MSMg01no160_c11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:26:02 2005
(368 letters)
>mm_chr18_59295388_59296155
Length = 768
Score = 669 bits (346), Expect = 0.0
Identities = 358/362 (98%)
Strand = Plus / Minus
Query: 5 gaattccagactatatatttaccacttattagacatggctgcagatgccattggagaatg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 gaattccagactatatatttaccacttattagacatggctgcagatgccattggagaatg 507
Query: 65 ctagcctttaaaccacaagatgacttcaattcccaacatgtttttgtcctgacatgattt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 ctagcctttaaaccacaagatgacttcaattcccaacatgtttttgtcctgacatgattt 447
Query: 125 tgatggatgttctgtttccttgaaacagtaacataattttcctcctcagttcacagtgag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 tgatggatgttctgtttccttgaaacagtaacataattttcctcctcagttcacagtgag 387
Query: 185 tctaggtctagctcgtgatctagcagcaataagaggcattgaggctggctttaataagag 244
|||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 386 tctaggtctagctcatgatctagcagcaataaggggcattgaggctggctttaataagag 327
Query: 245 ttagtatcatttccagggcataccctttatgttatctaggtaaggagagatgttaccatg 304
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 326 ttagtatcatttccagggcataccctttatgttatctaggtaaggggagatgttaccatg 267
Query: 305 gccagagtaacttctgctgcccaagaaagcttaaggcaaatatgagaacctgggtagaac 364
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 gccagaggaacttctgctgcccaagaaagcttaaggcaaatatgagaacctgggtagaac 207
Query: 365 ca 366
||
Sbjct: 206 ca 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 368
Length of database: 768
Length adjustment: 9
Effective length of query: 359
Effective length of database: 759
Effective search space: 272481
Effective search space used: 272481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no160_c11.g1 MSMg01no160_c11.g1 CHROMAT_FILE:
MSMg01no160_c11.g1 PHD_FILE: MSMg01no160_c11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:26:02 2005
(288 letters)
>mm_chr18_59146437_59147124
Length = 688
Score = 499 bits (258), Expect = e-146
Identities = 282/296 (95%), Gaps = 10/296 (3%)
Strand = Plus / Plus
Query: 1 aaatatggttcggaagaccaccacagacagccttttctgccctcgttccatcagatttgc 60
||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 191 aaatatggttcagaagaccaccacagacagccttttccgccctcgttccatcagatttgc 250
Query: 61 tcttcaagagctaag----------acctctcgattcttgttgcacacagaaaacaaaac 110
||||||||||||||| ||||||||||||| |||||||||||||||||||||
Sbjct: 251 tcttcaagagctaagaccactgctcacctctcgattctcgttgcacacagaaaacaaaac 310
Query: 111 cttttgcttcccacatacattctcctaaggcaacttgtttatctttcagggggaaagttc 170
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 cttttgcttcccacatacattctcctaaggcaacttgtttatctttcagggggaaagttc 370
Query: 171 ccttgagttgtacagtccaccctttcctgtgactgatgctagtgttttcaaatgtgagtc 230
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 ccttgagttgtacagtccaccctttcctgtgactgatgctagtgttttcaaatgtgagtc 430
Query: 231 acagacatacaccttaaagaaagaacagcagtgcatttctaagccatgtatgatga 286
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 431 acagacatacaccttaaagaaagaacagcagtgcattgctaagccatgtatgatga 486
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space: 189441
Effective search space used: 189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
