Query= MSMg01no165_f21.b1 MSMg01no165_f21.b1 CHROMAT_FILE:
MSMg01no165_f21.b1 PHD_FILE: MSMg01no165_f21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:33:29 2005
(669 letters)
>mm_chr18_5777346_5778415
Length = 1070
Score = 1038 bits (537), Expect = 0.0
Identities = 552/557 (99%), Gaps = 1/557 (0%)
Strand = Plus / Minus
Query: 9 gaattctcatatcttcttgacctttcctt-acaattccttgtttcctctgtagacaacta 67
||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 557 gaattctcataacttcttgacctttccttaaaaattccttgtttcctctgtagacaacta 498
Query: 68 ggctgactgcaggtaacatactgctgcagtctgtccttaaaggacccagcctaaggttta 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 ggctgactgcaggtaacatactgctgcagtctgtccttaaaggacccagcctaaggttta 438
Query: 128 gcgagtgtaaccttctggtcttgctcctcatctggagaaaggtgtgggcctttcacactg 187
|| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 437 gccagtgtaaccttctggtcttgctcctcatctggaggaaggtgtgggcctttcacactg 378
Query: 188 gtgttttacttgtagaggttttgaagatgacaattattacagagatcacctcctactttt 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 gtgttttacttgtagaggttttgaagatgacaattattacagagatcacctcctactttt 318
Query: 248 agactgctggtaatttctggcttgctgttgaaggttttactgatttatttattgattgtt 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 agactgctggtaatttctggcttgctgttgaaggttttactgatttatttattgattgtt 258
Query: 308 tctctttcacttctgagataatcagaatctccaagcactcttaagtacactgttagtggg 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 tctctttcacttctgagataatcagaatctccaagcactcttaagtacactgttagtggg 198
Query: 368 agtaacactacttgacttttggggatgctccatgaatcttgaagttttagggaaaaatca 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 agtaacactacttgacttttggggatgctccatgaatcttgaagttttagggaaaaatca 138
Query: 428 cacgtaatcatgattcatttttcctgttgataaagtgttcaaagtaatgtcctaatattc 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 cacgtaatcatgattcatttttcctgttgataaagtgttcaaagtaatgtcctaatattc 78
Query: 488 agttgaaggtctttccatctattttcttgaggaatttaagtctgtagctcttgtattgaa 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77 agttgaaggtctttccatctattttcttgaggaatttaagtctgtagctcttgtattgaa 18
Query: 548 atgcccttgttgatctg 564
|||||||||||||||||
Sbjct: 17 atgcccttgttgatctg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 669
Length of database: 1070
Length adjustment: 10
Effective length of query: 659
Effective length of database: 1060
Effective search space: 698540
Effective search space used: 698540
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no165_f21.g1 MSMg01no165_f21.g1 CHROMAT_FILE:
MSMg01no165_f21.g1 PHD_FILE: MSMg01no165_f21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:33:29 2005
(632 letters)
>mm_chr18_5634661_5635691
Length = 1031
Score = 1129 bits (584), Expect = 0.0
Identities = 620/632 (98%), Gaps = 1/632 (0%)
Strand = Plus / Plus
Query: 1 ttaggagatcattttgtctgtgggagaattcctactggattctttggtatttcagaaatt 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 201 ttaggagatcattttgtctgtgggagaattcctactggatcctttggtatttcagaaatt 260
Query: 61 atgtatggaggactccaagttcttcagttgctagaaaatatatacagacattttaatgta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgtatggaggactccaagttcttcagttgctagaaaatatatacagacattttaatgta 320
Query: 121 tgatttcttcatcaactttattcctattaaaagtatatgaaatttatattcttacacatc 180
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 321 tgatttcttcatcaactttattcctattaaaagtatataaaatttatattcttacacatc 380
Query: 181 tattttaaggtttatatatcatgttttaaaaaataaaatgttaggtcatatgagactaaa 240
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 381 tattttaaggtttatatatcatgttttgaaaaataaaatgttaggtcatatgagactaaa 440
Query: 241 atagttctattaatttgaggctattttagtctcaaataaaatgtcagattggcacttcat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atagttctattaatttgaggctattttagtctcaaataaaatgtcagattggcacttcat 500
Query: 301 gatatgatctcagttaaaatactagtaaacatttaaaaacaccagctattttcatatgtt 360
||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 501 gatatgatctcagttaaaatactagtaaacatttaaaaataatagctattttcatatgtt 560
Query: 361 ggatcatgcgtattttgaaaactcctactgcttaggtactgactttaccatgtgataatc 420
|||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 561 ggatcatgtgtattttgaaaactcctactgctttggtactgactttaccatgtgataatc 620
Query: 421 gcacttatgctggcgctgggtatgccacttcatgtgcatatggagcctagagttcagggt 480
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 621 gcacttatgctggcgctgggtatgctacttcatgtgcatatggagcctagagttcagggt 680
Query: 481 agtatgtgtgcccgaactaatggtctgtccctaatttaacactgaaatgtttaaacgtga 540
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 681 agtatgtgtgcccgaactaatggtctg-ccctaatttaacactgaaatgtttaaacgtga 739
Query: 541 aataaaaaccagtgtttttcaagtaataaaatccaagttaactatgtgattatatctgta 600
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 740 aataaaaaccagtgtttttcaagtaataaaatccaagttaagtatgtgattatatctgta 799
Query: 601 tggactgagacatcatcaagcagtctcttaca 632
||||||||||||||||||||| ||||||||||
Sbjct: 800 tggactgagacatcatcaagctgtctcttaca 831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1031
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1021
Effective search space: 635062
Effective search space used: 635062
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
