Query= MSMg01no175_n10.b1 MSMg01no175_n10.b1 CHROMAT_FILE:
MSMg01no175_n10.b1 PHD_FILE: MSMg01no175_n10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:47:00 2005
(313 letters)
>mm_chr18_75293109_75293821
Length = 713
Score = 576 bits (298), Expect = e-169
Identities = 304/306 (99%)
Strand = Plus / Plus
Query: 5 gaattcacttgttcttccccaatgcctgggcacagacaggctccagattctgccttgctg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacttgttcttccccaatgcctgggcacagacaggctccagattctgccttgctg 264
Query: 65 tggtctccgatgatcctcgtttgatcttggcagagcactagccaaggaaggaaggagaaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tggtctccgatgatcctcgtttgatcttggcagagcactagccaaggaaggaaggagaaa 324
Query: 125 tgtttgtcttagaaacctggcttcctgtacttcctgtggcagtggtactttgaaggcaga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgtttgtcttagaaacctggcttcctgtacttcctgtggcagtggtactttgaaggcaga 384
Query: 185 gaagtttttcagggaaatttggcacggcttgcctttcagtttagtcttcttaagaagtta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gaagtttttcagggaaatttggcacggcttgcctttcagtttagtcttcttaagaagtta 444
Query: 245 cattaggagcatttacagttcccagttggaaatttctaagctttcgattgaactttgtga 304
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 445 cattaggagcatttacagttcccagttggaaatttctaagcttttaattgaactttgtga 504
Query: 305 ctgtgt 310
||||||
Sbjct: 505 ctgtgt 510
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 713
Length adjustment: 9
Effective length of query: 304
Effective length of database: 704
Effective search space: 214016
Effective search space used: 214016
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no175_n10.g1 MSMg01no175_n10.g1 CHROMAT_FILE:
MSMg01no175_n10.g1 PHD_FILE: MSMg01no175_n10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:47:00 2005
(280 letters)
>mm_chr18_75435709_75436387
Length = 679
Score = 474 bits (245), Expect = e-138
Identities = 271/283 (95%), Gaps = 7/283 (2%)
Strand = Plus / Minus
Query: 1 cagttctggagcctgcagggagaacactttagaggagggac---gcacccccagaatttt 57
|||||| |||||||||||||||||||||||||||||||||| ||| |||||||||
Sbjct: 479 cagttccggagcctgcagggagaacactttagaggagggacacagca----cagaatttt 424
Query: 58 ctgcaacacgtgtgctccaagctggcccagaggcagcccaggaacaaccatggtgtacct 117
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 423 ctgcaacacgtgtgctccaagctggcccagaggcagcccgggaacaaccatggtgtacct 364
Query: 118 tgccttctgaggggtgcttatcacaggaaggaaccagacgcttggatggaagggatggga 177
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 363 tgccttctgaggggtgcttatcacaggaaggagccagacgcttggatggaagggatggga 304
Query: 178 gacgtgcaggaagtgagcgtggtctgactagaaagaacgccaggcgtccacacacccaac 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 gacgtgcaggaagtgagcgtggtctgactagaaagaacgccaggcgtccacacacccaac 244
Query: 238 agatgttagtacctaagagcacggccagaggcttagtgagcaa 280
||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 243 agatgcaagtacctaagagcacggccagaggcttagtgagcaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 280
Length of database: 679
Length adjustment: 9
Effective length of query: 271
Effective length of database: 670
Effective search space: 181570
Effective search space used: 181570
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
