CTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCCTGATCCGCGTGTCTGGAAGCGCAGGACTGGTTGGGAGCACAAAG
CGTTGTAGCAAAAAACTCACCACAGTCTCTGATGAACATGGAGCTTTAGG
ATATTGTTTCTTCTTTTGCTTAGTTGAATCCAGGCTTACTCATGTGTTAC
ACAGTTGTTCCCCCACTAAGCTACCTGCCCCACCCTTGCTTGTTCAGTTT
ATTTATTTTAAAGCTGGTATCTGCAGGCAGAAGAGTAGAGAAAGTCTGAC
TTTTCTTATGTAAAATCCATTGTAGAAATTTTAATAACTTATTGAGATAG
TGACTGTTTCTTTTAGCCATCTAATACATTTATGCTATGAGTTTATTATG
TTCTTGTCCCCCCCGCTTTATCTAAGGGAAACTTCACATAAAAATGGAGT
CTGCATTGCTTGGAACATGAAAGGCAGATGGAAAGCCACCATTATTGGGC
ACATGGTGACAGTTAATTTTTGAATTCTCCTGTATGTCTGCGTTTATTTT
GCACCTTATTATTTGCCTGCTCCGAGCTTATTTTTTGCTCCTGTTTTTAA
TATATATTTCGATCTCCACTCGCCATTTACTGCCTCTCCTCTCCATCTTT
TTTCCTTTCTTCCTCTACTGTTTCTCTACTTGCACGTTCTTCTTTCTTTT
CTTTTTCCCCCCCTTTTTTTACCTT

CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXCTCATGTGTGTACTTACATTGTATATGTC
TGATACGCGTACTTTACCCCCCACATGCGAATATTCACATCGTGTGATCA
GATATAATGAAGAAGTTGATATCAACTATTAAAGTGTAAATTGCACACAT
AACCGTCTGTATAATAACTGTCATACAAATACAGATTGCACTATATTGGT
TAATAATAACTAGTATTACCTATGTACCTTCTCCAAACTTTGATATTGTT
GCAGATTGACATGACATAGTCTGTTATAATTAAATATGATGTTTCATAAA
TGGAAAGTATTTTTTTCTACCCCCCCCCCACCTTTAATTTTTATTATATA
TATGTTCTGTCTCCTCCCTCCCTGTCAATCAAATCCATTATATTCAGAGT
ATATAAGCCTACATCCTTTATACTATCACTGTTTAAAATTATGTGTCCCG
GCACCTATCGCAACTCCAAAGCTTCTGGGTGTGGACCGACTCTTTCCTAA
AAACTCCAACACCATCCTCCACATCGTGCAAGATTCTTTCCCCACTTTCA
CCTCTCGATTTTTTTACTCCCCACCTATTCATTTTTTACGCCCTTTCATA
TTATCTTGTGTTAACCCGCTCAATTCATATTAACCCTCCCTTACAAACCT
CGTGTCGCCCTCTTACCCCCCTTTTTTACGTATGCCCCCTCCCCGTGCAC
CCACCCACCCTATACTTGTCAAG

Query= MSMg01no182_e16.b1 MSMg01no182_e16.b1 CHROMAT_FILE:
MSMg01no182_e16.b1 PHD_FILE: MSMg01no182_e16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:55:59 2005
         (493 letters)



>mm_chr18_20115341_20116233
          Length = 893

 Score =  861 bits (445), Expect = 0.0
 Identities = 478/491 (97%), Gaps = 5/491 (1%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcctgatccgc--gtgtctggaagcgcaggactggttgggagcacaaagcgttgta 62
           ||||||||||   ||  |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 gaattcctga---gcaggtgtctggaagcgcaggactggttgggagcacaaagcgttgta 710

                                                                       
Query: 63  gcaaaaaactcaccacagtctctgatgaacatggagctttaggatattgtttcttctttt 122
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 gcaaaaaactcaccacagtctctgatgaacatggagctttaggatattgtttcttctttt 650

                                                                       
Query: 123 gcttagttgaatccaggcttactcatgtgttacacagttgttcccccactaagctacctg 182
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 649 gcttagttgaatccaggcttactcatgtgttacacagttgttcccccactaagcaacctg 590

                                                                       
Query: 183 ccccacccttgcttgttcagtttatttattttaaagctggtatctgcaggcagaagagta 242
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 ccccacccttgcttgctcagtttatttattttaaagctggtatctgcaggcagaagagta 530

                                                                       
Query: 243 gagaaagtctgacttttcttatgtaaaatccattgtagaaattttaataacttattgaga 302
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 gagaaagtctaacttttcttatgtaaaatccattgtagaaattttaataacttattgaga 470

                                                                       
Query: 303 tagtgactgtttcttttagccatctaatacatttatgctatgagtttattatgttcttgt 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 tagtgactgtttcttttagccatctaatacatttatgctatgagtttattatgttcttgt 410

                                                                       
Query: 363 cccccccgctttatctaagggaaacttcacataaaaatggagtctgcattgcttggaaca 422
            |   | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 tctaactgctttatctaagggaaacttcacataaaaatggagtctgcattgcttggaaca 350

                                                                       
Query: 423 tgaaaggcagatggaaagccaccattattgggcacatggtgacagttaatttttgaattc 482
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 tgaaaggcagatggaaagccaccattattgggcacatggtgacagttaatttttgaattc 290

                      
Query: 483 tcctgtatgtc 493
           |||||||||||
Sbjct: 289 tcctgtatgtc 279


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 493
Length of database: 893
Length adjustment: 10
Effective length of query: 483
Effective length of database: 883
Effective search space:   426489
Effective search space used:   426489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)