TAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCAGAGATATTAAGAATGCAAACACAATAAAGGAAAGAAAGCATATGC
ATTTTTTATTTATGACACTATTGTTAATATTTTAAGCTCTTTGTAAAAGA
TAAAGTCTCAGGTTGATTTAAAAAGAAACTCATTTATATTCTGTAGTAAA
GAAACCACAAGAGGCTAAAGAGACAAATTCAAAGCCTGAGAATATCTTTT
TCCACAAAGATTTTGCTGAATTTAGAGGATATTTGTGTGGCTACAAATTT
GAGACAAAACTTCTATAAAGAAGAAGAAAAATAAAAACAAACAAAAACAA
AAGAGATGAGATTGGCATCCCACACAGACAAAGCTGGACACTTGAGAACA
GGAAAGGGCAAGACCACGCAAAAAAGAAAATTGCCATTGGGAAGAAAGCA
AAAGCACAGAAAATACAATAAAAGCCAGTATTTGCTTATCTTCAAAGAGG
TCAAAAAGACATTGTATCCATAACACATAAAGACACTGTTTCAAAGAGCA
GAGAACAATAAAGAGCTGAAATTGAAAAAAAAAAACACTTTACAGAATCA
CATTATTATTACATTGCTGGTAATGTACTATTACAAACAATTGTGTCAGT
AGCAAGGCAGAAAAGCAACACAAGATTAAGAGAAGGAATTTATAAACCTC
TATTTAAATAAGAATCACTTCTAAA

GAATACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTCACCCGAGGAATACTGAATGGGAGAG
AAGCACCTGAAAAAATGTCCCACATCCTTAATCATCAGGGAAATGCAAAT
CAAAACAACCCTGAGATTTCACCACACATCAGTCACAATGGCTAAGATGA
AATATTCAGGTGACAGCATATGCTGTTGAGGATTTAGAGAAAGAGGAACA
CTCCTCCATTGTTGGTGGCATTGCAAGCTTGTACAAACACTCTGGATATC
AGTCTGACAGTTCCGCAAAAAACCGTACATAGTTAATATCAGATAATTCA
GCAATCAACATTTCTGGGAATACACCTCTCACCATGTCTCAATATGTTAG
TTCCCATGCTCCTAAAACGCCCCATAAAAGACCCTCACCTACTGCCTATT
AAAAACCTCGCATACGCATCCTACAATGTACTATTTAACTTTTTTTAATT
GAACCCCCGCGCCAATGAGCCGTTTATTTAACCCCCGTTGCGACTTTACT
ACCCCCTATCTATTCCATAATAACTCCAACCCTAAAGAATTTTCCCACAT
TCATTACCCATTTTGGTATTCCCCCACTTTCACCCATTCTCTTTTTCGCG
CCCCATTACCTACTCATTTTATCGGACGCGATAATTACATAATGCGTGCA
CCCGGTAGTAGATTATTATCTCTATCTACCCTTCAATTTTATTCTAATAT
TCCCATTATATTACTAATCCCCTCGCTGATTCATCCCAACATCTATCCTT
CCN

Query= MSMg01no182_o04.b1 MSMg01no182_o04.b1 CHROMAT_FILE:
MSMg01no182_o04.b1 PHD_FILE: MSMg01no182_o04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:56:45 2005
         (659 letters)



>mm_chr18_90339260_90340319
          Length = 1060

 Score = 1064 bits (550), Expect = 0.0
 Identities = 574/582 (98%), Gaps = 1/582 (0%)
 Strand = Plus / Plus

                                                                       
Query: 79  aaaagataaagtctcaggttgatttaaaaagaaactcatttatattctgtagtaaagaaa 138
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 279 aaaagataaagtctcaggttgatttaaaaaaaaactcatttatattctgtagtaaagaaa 338

                                                                       
Query: 139 ccacaagaggctaaagagacaaattcaaagcctgagaatatctttttccacaaagatttt 198
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 ccacaagaggctaaagagacaaattcaaagcctgagaatatctttttccacaaagatttt 398

                                                                       
Query: 199 gctgaatttagaggatatttgtgtggctacaaatttgagacaaaacttctataaagaaga 258
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 gctgaatttagaggatatttgtgtggctacaaatttgagacaaaacttctataaagaaga 458

                                                                       
Query: 259 agaaaaataaaaacaaacaaaaacaaaagagatgagattggcatcccacacagacaaagc 318
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 agaaaaataaaaacaaacaaaaacaaaagagatgagattggcatcccacacagacaaagc 518

                                                                       
Query: 319 tggacacttgagaacaggaaagggcaagaccacgcaaaaaagaaaattgccattgggaag 378
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 519 tggacacttgagaacaggaaagggcaagaccaagcaaaaaagaaaattgccattgggaag 578

                                                                       
Query: 379 aaagcaaaagcacagaaaatacaataaaagccagtatttgcttatcttcaaagaggtcaa 438
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 aaagcaaaagcacagaaaatacaataaaagccagtatttgcttatcttcaaagaggtcaa 638

                                                                       
Query: 439 aaagacattgtatccataacacataaagacactgtttcaaagagcagagaacaataaaga 498
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 aaagacattgtatccataatacataaagacactgtttcaaagagcagagaacaataaaga 698

                                                                       
Query: 499 gctgaaattgaaaaaaaaaaa-cactttacagaatcacattattattacattgctggtaa 557
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 699 gctgaaattgaaaaaaaaaaaacactttacagaatcacattattattacattgctggtaa 758

                                                                       
Query: 558 tgtactattacaaacaattgtgtcagtagcaaggcagaaaagcaacacaagattaagaga 617
           ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| |||
Sbjct: 759 tgtactattacaaacaattatgtcagtaacaaggcagaaaagcaacacaagattaaaaga 818

                                                     
Query: 618 aggaatttataaacctctatttaaataagaatcacttctaaa 659
           ||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 819 aggaatttataaaccactatttaaataagaatcacttctaaa 860


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 659
Length of database: 1060
Length adjustment: 10
Effective length of query: 649
Effective length of database: 1050
Effective search space:   681450
Effective search space used:   681450
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)