Query= MSMg01no183_i03.b1 MSMg01no183_i03.b1 CHROMAT_FILE:
MSMg01no183_i03.b1 PHD_FILE: MSMg01no183_i03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:57:32 2005
(205 letters)
>mm_chr18_84107456_84108059
Length = 604
Score = 344 bits (178), Expect = 2e-99
Identities = 190/194 (97%), Gaps = 1/194 (0%)
Strand = Plus / Minus
Query: 6 aattcactgtcccaattttgagacagtttaattattgaggcattcttcctctactttagt 65
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 398 aattcactgtcccaattttgagacagtttaattagtgaggcattcttcctctactttagt 339
Query: 66 ctgctcattcaagtcataatcccgccctctgtaatcagaccacttcctcttcctcttggc 125
||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 ctgctcactcaa-tcataatcccgccctctgtaatcagaccacttcctcttcctcttggc 280
Query: 126 cacaaggaggacttgagtctcttctttattatctagccaagtgttaacacttttggaaac 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 cacaaggaggacttgagtctcttctttattatctagccaagtgttaacacttttggaaac 220
Query: 186 caatgttgcagagt 199
|||||||| |||||
Sbjct: 219 caatgttgtagagt 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 205
Length of database: 604
Length adjustment: 8
Effective length of query: 197
Effective length of database: 596
Effective search space: 117412
Effective search space used: 117412
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no183_i03.g1 MSMg01no183_i03.g1 CHROMAT_FILE:
MSMg01no183_i03.g1 PHD_FILE: MSMg01no183_i03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:57:33 2005
(289 letters)
>mm_chr18_83974100_83974788
Length = 689
Score = 520 bits (269), Expect = e-152
Identities = 284/289 (98%)
Strand = Plus / Plus
Query: 1 tgttttgccattttgagtttggtatcttcttcagtttccagcacactgcagaagtcatgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgttttgccattttgagtttggtatcttcttcagtttccagcacactgcagaagtcatgc 260
Query: 61 tgaacccaggcctagtaacccagagtttggacttagaagggtgcattcagagggaagatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgaacccaggcctagtaacccagagtttggacttagaagggtgcattcagagggaagatt 320
Query: 121 ggtaccctttattttatctgggcattcctcccatgggactgtcagtttctgtctttgacc 180
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggcaccctttattttatctgggcattcctcccatgggactgtcagtttctgtctttgacc 380
Query: 181 ttggagtaccgtctctcagactccgctactcagacttgcctggctgagttaaccgaggaa 240
|||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 381 ttggagcactgtctctcagactccgatactcagacttgcctggctgagttaaccgaggaa 440
Query: 241 aggtgagaagagttaattgtgcattttggagggaatttctgccattgtc 289
||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 441 aggtgagaagagttaattgtgcattttggagggaatttccgccattgtc 489
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
