Query= MSMg01no186_c16.b1 MSMg01no186_c16.b1 CHROMAT_FILE:
MSMg01no186_c16.b1 PHD_FILE: MSMg01no186_c16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:01:05 2005
(316 letters)
>mm_chr18_82627536_82628251
Length = 716
Score = 505 bits (261), Expect = e-147
Identities = 297/309 (96%), Gaps = 1/309 (0%)
Strand = Plus / Minus
Query: 5 gaattccagcctcagaaacaatgtaaggaagcccaaggtggtagtgcacacctgcacacc 64
||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||
Sbjct: 309 gaattccagcctcagaaacaatgcaaggaagcctgaggtggtagtgcacacctgcacacc 250
Query: 65 cagaggtgactggggtggtgcatgcctgtaaacccagaggtggctggagtggtggtgcac 124
||||||||||||||||||| || |||| | |||||||||||||||||||||||||||||
Sbjct: 249 cagaggtgactggggtggtacacacctgcacacccagaggtggctggagtggtggtgcac 190
Query: 125 acctgtaaatccagaggcacggaaacagagacaggccagtgtctggagcttgctgaacag 184
|||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 189 acctgtaaatccagaggcacagaaacagacacaggccagtgtctggagcttgctgaacag 130
Query: 185 atgctaggtaacttggtgagtcccagggcagtgagaag-cctgtgccaataaaaataata 243
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 129 ctgctaggtaacttggtgagtcccagggcagtgagaagccctgtgccaataaaaataata 70
Query: 244 agaaagattggtggtgccttccgggtaagggcacccaaggttgttctctggtctccacac 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 agaaagattggtggtgccttccgggtaagggcacccaaggttgttctctggtctccacac 10
Query: 304 acacccatg 312
|||||||||
Sbjct: 9 acacccatg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 716
Length adjustment: 9
Effective length of query: 307
Effective length of database: 707
Effective search space: 217049
Effective search space used: 217049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no186_c16.g1 MSMg01no186_c16.g1 CHROMAT_FILE:
MSMg01no186_c16.g1 PHD_FILE: MSMg01no186_c16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:01:05 2005
(286 letters)
>mm_chr18_82473478_82474163
Length = 686
Score = 503 bits (260), Expect = e-147
Identities = 278/284 (97%)
Strand = Plus / Plus
Query: 1 attatgtcagcaacatctctgcctatgtcagtcaccatcacctgtcggacgcaaggatgg 60
||||||||||||||||| |||||||||||||||||||||||||| | || ||||||||||
Sbjct: 201 attatgtcagcaacatccctgcctatgtcagtcaccatcacctgccagaagcaaggatgg 260
Query: 61 tttgtgtgcatgagaagttcagttctggggtcacagctgacatcacgccagtaccctcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttgtgtgcatgagaagttcagttctggggtcacagctgacatcacgccagtaccctcta 320
Query: 121 ttcacggagctttgagatgctgttgtttaaaagggagagggcagcacatgggatctgaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttcacggagctttgagatgctgttgtttaaaagggagagggcagcacatgggatctgaat 380
Query: 181 tctccatggccggatgccttctcagcgctatcttctctaacagcctggtttgcttggctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tctccatggccggatgccttctcagcgctatcttctctaacagcctggtttgcttggctg 440
Query: 241 tgaggggggtgacagggatggtgtaacctggcatagcatcactg 284
|||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 441 tgaggggggtgacatggatggtgtaacctggcataacatcactg 484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
