Query= MSMg01no193_c11.b1 MSMg01no193_c11.b1 CHROMAT_FILE:
MSMg01no193_c11.b1 PHD_FILE: MSMg01no193_c11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:11:25 2005
(415 letters)
>mm_chr18_86964070_86964883
Length = 814
Score = 688 bits (356), Expect = 0.0
Identities = 392/404 (97%), Gaps = 1/404 (0%)
Strand = Plus / Plus
Query: 4 ggaattctattgaaatgtttctaacttctcataattgaaatacataaattgaccatctag 63
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 204 ggaattctattgaaatgtttctaacttctcataattgaaatacgtaaattgaccatctag 263
Query: 64 ggtagaggaggaacagctgactcctgagaatctcagcgaaggagcattggtaaaaatatt 123
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ggtagaggaggaacagctgagtcctgagaatctcagcgaaggagcattggtaaaaatatt 323
Query: 124 ctatatgagggacttcctgtctgcgctggcaaccatggagaagctttgaggtaatgaatc 183
||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| |||
Sbjct: 324 ctatatgagggacttcctgtctgggctggcaaccatggagaagctttgaggttatggatc 383
Query: 184 actatggcttaagttcacagagtgctaacctatgcctttcagaatagcctcattgagtgt 243
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 actatggcataagttcacagagtgctaacctatgcctttcagaatagcctcattgagtgt 443
Query: 244 caattctgatctagggagaagggcagagagaaacctctgtgaatgttatattcatcttta 303
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 444 caattctgatctagggagaagggaagagagaaacctctgtgaatgttatattcatcttta 503
Query: 304 gggggctccttaaagcctagaacggcataagaccctataaagctcatggcttattatcta 363
|||||||||||||| |||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 504 gggggctccttaaaacctagaacggcataagaccctataaagctcatggcttaataacta 563
Query: 364 acaataaaaaaaaagaggatgaatgtcaactgaagtgaaaactt 407
||||||||| ||| ||||||||||||||||||||||||||||||
Sbjct: 564 acaataaaagaaa-gaggatgaatgtcaactgaagtgaaaactt 606
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 415
Length of database: 814
Length adjustment: 9
Effective length of query: 406
Effective length of database: 805
Effective search space: 326830
Effective search space used: 326830
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no193_c11.g1 MSMg01no193_c11.g1 CHROMAT_FILE:
MSMg01no193_c11.g1 PHD_FILE: MSMg01no193_c11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:11:25 2005
(381 letters)
>mm_chr14_109045092_109045872
Length = 781
Score = 118 bits (61), Expect = 5e-31
Identities = 103/117 (88%), Gaps = 2/117 (1%)
Strand = Plus / Minus
Query: 264 gcctgataagagagacctgtgctgagaaatggaaaccta-acctattggctgccagaatg 322
||||||||||||||||||||||||||||||||||||| | || | |||||||||| |||
Sbjct: 579 gcctgataagagagacctgtgctgagaaatggaaacccatgcc-actggctgccagcatg 521
Query: 323 aagtgatttatgttatcagtcacatctagggattaggcttgttgtttttgcctttat 379
| || |||||||| |||||| ||||||||||||| ||||| | |||||||| |||||
Sbjct: 520 aggttatttatgtcatcagttacatctagggattgggcttatggtttttgcatttat 464
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 381
Length of database: 781
Length adjustment: 9
Effective length of query: 372
Effective length of database: 772
Effective search space: 287184
Effective search space used: 287184
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
