This page provides previous versions of nucleotide polymorphisms of MSM/Ms and JF1/Ms strains, corresponding to GRCm38 coordinate by Liftover from GRCm37.
Previous ver.
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RIKEN MSM/Ms Mouse BAC clones & Library
BAC clone ordering.
BAC Information
Click to search
Search Parameter
BAC name
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search by nearby gene name.
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Search Result
BAC
Clone Name
MSMg01-193O06
Chromosome
18 (Build37)
Map Location
51,476,128 - 51,476,338
singlet/doublet
singlet
Overlap gene
none
Upstream gene
Hdhd1a
,
LOC100042373
,
LOC100042385
,
Prr16
Downstream gene
EG240289
Link
Open Mouse BAC browser
Click to get alignment info.
name
Hdhd1a
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:67365
MGI:1914615
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
name
LOC100042373
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:100042373
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins
pseudo
: _no_value
name
LOC100042385
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:100042385
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 18 ESTs, 8 Proteins
pseudo
: _no_value
name
Prr16
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:71373
MGI:1918623
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
name
EG240289
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:240289
MGI:3649015
definition
note
: predicted gene, EG240289
pseudo
: _no_value
name
Hdhd1a
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:142376210
GeneID:67365
MGI:1914615
definition
exception
: unclassified transcription discrepancy
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
product
: haloacid dehalogenase-like hydrolase domain
transcript_id
: NM_026108.2
name
Prr16
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:124487026
GeneID:71373
MGI:1918623
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
product
: proline rich 16
transcript_id
: NM_001081224.1
name
Hdhd1a
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:13385612
CCDS:CCDS29244.1
GeneID:67365
MGI:1914615
definition
codon_start
: 1
exception
: mismatches in translation
product
: haloacid dehalogenase-like hydrolase domain
protein_id
: NP_080384.1
name
Prr16
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:124487027
GeneID:71373
MGI:1918623
definition
codon_start
: 1
product
: proline rich 16
protein_id
: NP_001074693.1
name
LOC100042373
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:100042373
definition
number
: 1
pseudo
: _no_value
name
LOC100042373
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:100042373
definition
number
: 2
pseudo
: _no_value
name
LOC100042373
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:100042373
definition
number
: 3
pseudo
: _no_value
name
LOC100042373
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:100042373
definition
number
: 4
pseudo
: _no_value
name
LOC100042373
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:100042373
definition
number
: 5
pseudo
: _no_value
name
LOC100042385
(CDS detail)
type
misc_RNA
link
vega
ensembl
NCBI
xref
GI:149269765
GeneID:100042385
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 18 ESTs, 8 Proteins
product
: similar to Polymerase (RNA) II (DNA directed) polypeptide C
pseudo
: _no_value
transcript_id
: XR_033536.1
clone name
MSMg01-305D05
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-165B07
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-338B06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-329M07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-345M17
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-358I10
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-337C05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-107B08
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-182H23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-521M10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-498B08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-263F09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-324H05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-467C03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-520P15
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-132J01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-434D04
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-449L21
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-120O03
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-261L24
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-194E08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-470D09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-096H05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-271A06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-475D19
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-521A05
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-093G19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-172A16
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-484O02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-436N04
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-511J13
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-529B03
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-334D14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-289O19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-530A21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-403G08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-484H20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-524D19
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-374G10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-323C07
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-410F07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-303H09
singlet/doublet
doublet
plural/unique
plural
clone name
MSMg01-443O16
singlet/doublet
singlet
plural/unique
plural
clone name
MSMg01-517A08
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-358A23
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-545M12
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-540A10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-092P02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-307A15
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-140F03
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-429A16
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-384I08
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-073P15
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-193N06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-193O06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-268O21
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-175J03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-180I08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-123C23
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-392M13
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-426P13
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-460F17
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-415D13
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-343C08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-351G17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-060F21
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-180L02
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-364G12
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-370P21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-527C19
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-329D11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-471K18
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-120H23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-072H23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-293J17
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-499L03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-134K08
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-507J22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-080F14
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-083D03
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-402P10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-378P21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-063J21
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-296F11
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-413O09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-400O18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-387I21
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-441H24
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-261H17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-270C04
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-548F03
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-525F16
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-520A07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-262A12
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-546D06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-527F11
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-181O09
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-122M02
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-136J03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-346P06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-526M13
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-346K19
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-100F17
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-382H01
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-338A20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-271G08
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-509L10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-452H05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-262M22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-390D03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-360A23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-185I16
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-130H02
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-500D18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-279A14
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-373I08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-083O14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-478L02
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-386P16
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-528G11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-132D13
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-188K04
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-144G11
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-226E06
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-280L17
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-144A13
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-125P02
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-121D05
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-171I04
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-342F22
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-193M04
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-263H02
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-030D05
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-092L20
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-053P14
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-032M21
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-238M10
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-169M22
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-292N12
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-088F22
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-140G06
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-311B12
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-339H08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-151O09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-001O11
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-213P18
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-111D19
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-269A21
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-206M05
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-209K16
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-279H06
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-098M24
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-198L05
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-216C21
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-314D04
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-064D06
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-282P22
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-259C09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-042G23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-280N04
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-004F11
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-027G21
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-228C24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-155O07
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-215H11
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-261A07
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-305C14
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-139H22
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-341E02
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-023P02
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-132F24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-124H22
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-049A23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-218I11
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-137M21
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-324A10
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-286C23
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-288J23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-230L07
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-029I10
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-341J11
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-071J17
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-054N10
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-323K09
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-168A08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-226C06
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-085C16
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-006D12
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-181E19
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-022J06
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-299D24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-101M05
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-244J13
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-266A06
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-165J24
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-053E15
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-109B24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-085N11
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-109M14
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-053K14
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-247A03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-140H22
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-244L04
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-026D16
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-334K23
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-240B18
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-077L13
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-188A03
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-279C21
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-105H08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-120M16
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-300H04
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-070K07
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-326K08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-285J10
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-329B21
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-142D14
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-123F23
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-086G11
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-134J18
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-044O24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-063D21
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-307K15
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-182H06
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-250E23
singlet/doublet
singlet
plural/unique
unique