Query= MSMg01no194_o10.b1 MSMg01no194_o10.b1 CHROMAT_FILE:
MSMg01no194_o10.b1 PHD_FILE: MSMg01no194_o10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:13:55 2005
(681 letters)
>mm_chr18_27183155_27184235
Length = 1081
Score = 1241 bits (642), Expect = 0.0
Identities = 669/678 (98%)
Strand = Plus / Minus
Query: 4 ggaattcacaatctacctcagagtcacagagtcatcagagtctgcctattcctcctggat 63
||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 881 ggaattcacaatctagataagagtcacagagtcatcagagtctgcctattcctcctggat 822
Query: 64 gctcttatttaaagtgtacagcaccacaaagagcctgatatttatattttcatttctttt 123
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 821 gctcttattaaaagtgtacagcaccacaaagagcctgatatttatattttcatttctttt 762
Query: 124 tttgcttcatgtattaggtgaagtctataattttacctgtgtaataaaagcttagttgtt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 tttgcttcatgtattaggtgaagtctataattttacctgtgtaataaaagcttagttgtt 702
Query: 184 ttttctttattataaatatctttaaaactgttttatttctcacctgattttctttctcca 243
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 701 ttttctttattataaatatctttaaaactgttttatttatcacctgattttctttctcca 642
Query: 244 ctattgaccataaatgccctgtaataacagaaacagaaaataaagggtcttttattatgc 303
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 ctattgaccataaatgtcctgtaataacagaaacagaaaataaagggtcttttattatgc 582
Query: 304 tgaaagatgaccttactgtttatatttctgctctaattgcttctcctccccatcttttcc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 tgaaagatgaccttactgtttatatttctgctctaattgcttctcctccccatcttttcc 522
Query: 364 actgatacataaactatttccagtaatcacagaaaggcttaaattttcttcaaaatctat 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 actgatacataaactatttccagtaatcacagaaaggcttaaattttcttcaaaatctat 462
Query: 424 gatcttccaccaattcaccatgagatatttttgtatgtttctgaatgtctgatatgcagg 483
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 gatcttccaccagtttaccatgagatatttttgtatgtttctgaatgtctgatatgcagg 402
Query: 484 ataccaaagccatggcacaatagggtgcacttggatgccctcagagtctattaggagaca 543
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 401 ataccaaagccatggcacaatagggtgcacttggatgccctctgagtctattaggagaca 342
Query: 544 cagtttttctgcagaattactttaaaaataataagttttcattatggatctaaaaatagg 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 cagtttttctgcagaattactttaaaaataataagttttcattatggatctaaaaatagg 282
Query: 604 ttgtaaattccttaggaatggggatccaggaagttaagaatcatatgtactgtcatcttt 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 ttgtaaattccttaggaatggggatccaggaagttaagaatcatatgtactgtcatcttt 222
Query: 664 gtcccgtaatgtcaatca 681
||||||||||||||||||
Sbjct: 221 gtcccgtaatgtcaatca 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 681
Length of database: 1081
Length adjustment: 10
Effective length of query: 671
Effective length of database: 1071
Effective search space: 718641
Effective search space used: 718641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no194_o10.g1 MSMg01no194_o10.g1 CHROMAT_FILE:
MSMg01no194_o10.g1 PHD_FILE: MSMg01no194_o10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:13:55 2005
(620 letters)
>mm_chr18_27053229_27054246
Length = 1018
Score = 1156 bits (598), Expect = 0.0
Identities = 614/620 (99%), Gaps = 2/620 (0%)
Strand = Plus / Plus
Query: 1 agagaccctaagtcacagtcatctacaagagattccatgttaataagtagatatgttaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agagaccctaagtcacagtcatctacaagagattccatgttaataagtagatatgttaga 260
Query: 61 aatattatttaaataatttatttttgttctcctcctttattgacctagggctacatcatc 120
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 261 aatattatttaaataatttatttttgttctcctcctttattgacccagggctacatcatc 320
Query: 121 cacaaaggtccttctccttaaaagagtacataggtatggaggcattggggtacgaagtgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cacaaaggtccttctccttaaaagagtacataggtatggaggcattggggtacgaagtgc 380
Query: 181 ctttcctcttttactcatggttttaatgtaccttggattttttttttcactgataaattt 240
||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 381 ctttcctcttttactcatggttttaatgtaccttgga--ttttttttccctgataaattt 438
Query: 241 gctgctatgtctagtaaagggtcgactgaatcaacattcttcattttctaatttcaaatg 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 439 gctgctatgtctagtaaagggtcgactgaatcaacattcttcattttctaatttcagatg 498
Query: 301 aaacactgactctcatctttagcattggcagaagactagtggtacaatttaaagaattga 360
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 aaacactgactctcatcttcagcattggcagaagactagtggtacaatttaaagaattga 558
Query: 361 gacaatttcatgtttagaaatgtgtcctcaccgccagacagcccaactggcatgacggaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 gacaatttcatgtttagaaatgtgtcctcaccgccagacagcccaactggcatgacggaa 618
Query: 421 aaggaaatttagagaaaaaaaaatctatttttttgggaggcttactaagacaaaatgatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 aaggaaatttagagaaaaaaaaatctatttttttgggaggcttactaagacaaaatgatt 678
Query: 481 ccagtttttagaagatgcggcagaaatgtatgctattaacgagtgttaacaccacaaaca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 ccagtttttagaagatgcggcagaaatgtatgctattaacgagtgttaacaccacaaaca 738
Query: 541 tattggttcaacaaatgcctttccattttatgactcctgaagcatagatatttaaaaaag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 tattggttcaacaaatgcctttccattttatgactcctgaagcatagatatttaaaaaag 798
Query: 601 ggcaagtcaagaaaattgcc 620
||||||||||||||||||||
Sbjct: 799 ggcaagtcaagaaaattgcc 818
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 620
Length of database: 1018
Length adjustment: 10
Effective length of query: 610
Effective length of database: 1008
Effective search space: 614880
Effective search space used: 614880
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
