Query= MSMg01no204_c06.b1 MSMg01no204_c06.b1 CHROMAT_FILE:
MSMg01no204_c06.b1 PHD_FILE: MSMg01no204_c06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:25:34 2005
(371 letters)
>mm_chr18_63953551_63954317
Length = 767
Score = 671 bits (347), Expect = 0.0
Identities = 359/365 (98%), Gaps = 4/365 (1%)
Strand = Plus / Plus
Query: 5 gaattctttataacatctgggtcttccctttttgtttttgaaaagtgtacataaataaat 64
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctttataacatatgggtcttccctttttgtttttgaaaagtgtacataaataaa- 263
Query: 65 aaagactttgtatttactgtagagtgccaagatgtctaatgcacctgcactgtgtcacct 124
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ---gactttgtatttactgtagagtgccaagatgtctaatgcacctgcactgtgtcacct 320
Query: 125 tttgataggctggagccagttagccgccatgcactgtgttatgttgcctgacctgctggg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttgataggctggagccagttagccgccatgcactgtgttatgttgcctgacctgctggg 380
Query: 185 gctggagagattcaggcctcctctcctggagatgctagctcgaagatggcaggaccgatg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gctggagagattcaggcctcctctcctggagatgctagctcgaagatggcaggaccgatg 440
Query: 245 cttggaggtaaggttgagtgataaggaagatacaattatttcacaaattcagcgaagtgt 304
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cttggaggtaaggtcgagtgataaggaagatacaattatttcacaaattcagcgaagtgt 500
Query: 305 gaattttaagcaaaagtaactttatcccctgtgcctttagcagttactcctctctttaca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaattttaagcaaaagtaactttatcccctgtgcctttagcagttactcctctctttaca 560
Query: 365 gaaga 369
|||||
Sbjct: 561 gaaga 565
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 371
Length of database: 767
Length adjustment: 9
Effective length of query: 362
Effective length of database: 758
Effective search space: 274396
Effective search space used: 274396
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no204_c06.g1 MSMg01no204_c06.g1 CHROMAT_FILE:
MSMg01no204_c06.g1 PHD_FILE: MSMg01no204_c06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:25:34 2005
(288 letters)
>mm_chr18_64119386_64120073
Length = 688
Score = 542 bits (280), Expect = e-158
Identities = 286/288 (99%)
Strand = Plus / Minus
Query: 1 tttacgtagaccaggctgcctttgaactcagagctttgcctgcctctgctgggattaaat 60
|||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 582 tttaggtagaccaggctgcctttgaactcagagctttgcctgcctctggtgggattaaat 523
Query: 61 gtctgggcaaccacatctagcccaaagtgcttttttgttttgttttgtttatctaaataa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 gtctgggcaaccacatctagcccaaagtgcttttttgttttgttttgtttatctaaataa 463
Query: 121 aaaagagctactaggtaggaacttcagcagacctttgatttctggatgccaagtccttgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 aaaagagctactaggtaggaacttcagcagacctttgatttctggatgccaagtccttgg 403
Query: 181 gtgtcagatatgcttcctcaagcccatcagaatttacataagcagtctggctattctcga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 gtgtcagatatgcttcctcaagcccatcagaatttacataagcagtctggctattctcga 343
Query: 241 ataactcagcaggcttccccactacttaggaggtcaactgattagtct 288
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 ataactcagcaggcttccccactacttaggaggtcaactgattagtct 295
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space: 189441
Effective search space used: 189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
