Query= MSMg01no204_d17.b1 MSMg01no204_d17.b1 CHROMAT_FILE:
MSMg01no204_d17.b1 PHD_FILE: MSMg01no204_d17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:25:41 2005
(325 letters)
>mm_chr18_87447983_87448709
Length = 727
Score = 590 bits (305), Expect = e-173
Identities = 321/327 (98%), Gaps = 2/327 (0%)
Strand = Plus / Plus
Query: 1 tcagtcataggaatggaatcaataattgctattttgaccccaatttttctttacacacat 60
||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 201 tcagtcataggaatggaatcaataattgctattttgatcttaatttttctttacacacat 260
Query: 61 acacatacacacacatacatgcacacacacagtgagaatgaagaaagcaggaggtgctag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acacatacacacacatacatgcacacacacagtgagaatgaagaaagcaggaggtgctag 320
Query: 121 cgtggtaaaaacttacatattgatcacatcatgatgcacatgaataacatcaagctatgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cgtggtaaaaacttacatattgatcacatcatgatgcacatgaataacatcaagctatgc 380
Query: 181 acttcaatcaacattttattcaattacaacagtttaactgttaaagaagccaaatgtcta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acttcaatcaacattttattcaattacaacagtttaactgttaaagaagccaaatgtcta 440
Query: 241 agaccatttttaaaaaaattaagcagaaaaaaa--tcatctcttgaatataagagaaaga 298
|||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 441 agaccatttttaaaaaaactaagcagaaaaaaaaatcatctcttgaatataagagaaaga 500
Query: 299 gaacctttttgctgcataatctgggag 325
|||||||||||||||||||||||||||
Sbjct: 501 gaacctttttgctgcataatctgggag 527
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 325
Length of database: 727
Length adjustment: 9
Effective length of query: 316
Effective length of database: 718
Effective search space: 226888
Effective search space used: 226888
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no204_d17.g1 MSMg01no204_d17.g1 CHROMAT_FILE:
MSMg01no204_d17.g1 PHD_FILE: MSMg01no204_d17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:25:41 2005
(343 letters)
>mm_chr18_87532578_87533320
Length = 743
Score = 615 bits (318), Expect = e-180
Identities = 336/342 (98%)
Strand = Plus / Minus
Query: 1 tcacttctaaaagagtgtggagttaatttaattgatcagtagcagggtgatctgaagatg 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 542 tcacttctaaaagagtgtggagttaatttaattgatcactagcagggtgatctgaagatg 483
Query: 61 aagtggagacatgtgacacataccctctttccaagtgcttccccatccaatccaatatac 120
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 482 aagtggagacatgtgacacataccctctttccaagtgctttcccatccaatccaatatac 423
Query: 121 agctgcaactactattgacatctagttattgaaagaaaaagaaagagaaagaaagaacaa 180
|||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 422 agctgcaactactattgagatctagttattgaaagaaaaagaaagtgaaagaaagaacaa 363
Query: 181 aatgagcacagacaatccactgctatgacattcaggcaacagtaaagtaaaaagaaacct 240
||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 362 aattagcacagacaatccactgctatgacattcaggcaacagtaaaataaaaagaaacct 303
Query: 241 ccagacatttatatgtgtagctgctggatggacagcatctgcttctgacgcttgctcatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ccagacatttatatgtgtagctgctggatggacagcatctgcttctgacgcttgctcatc 243
Query: 301 acttacagaagtgcaagccaaaattggaaacacaattgatat 342
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 acttacagaagtgcaagccaaaattggaaacacaattgatat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 343
Length of database: 743
Length adjustment: 9
Effective length of query: 334
Effective length of database: 734
Effective search space: 245156
Effective search space used: 245156
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
