Query= MSMg01no210_c07.b1 MSMg01no210_c07.b1 CHROMAT_FILE:
MSMg01no210_c07.b1 PHD_FILE: MSMg01no210_c07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:34:33 2005
(636 letters)
>mm_chr18_61968424_61969455
Length = 1032
Score = 1079 bits (558), Expect = 0.0
Identities = 612/632 (96%), Gaps = 4/632 (0%)
Strand = Plus / Plus
Query: 5 gaattcagatcagtgcttatggtatatactggcacggtggaaacatttctcacttacaaa 64
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagatcaatgcttatggtatatactggcacggtggaaacatttctcacttacaaa 264
Query: 65 gaaacatggcttcatgctcaaagactctggctgatgcgaagatggggcctcaaacagtgt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gaaacatggcttcatgctcaaagactctggctgatgcgaagatggggcctcaaacagtgt 324
Query: 125 cacttccagttagtcagtttcttactgttaaatctaaataccaccttccctctccctccc 184
||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 325 cacttccagtt----agtttcttactgttaaatctaaataccacattccctctccctccc 380
Query: 185 cgttcttagtacctggcagggaacagacactcagggatatctgttgcatagatgtagctg 244
||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||
Sbjct: 381 cgttcttagtacctggcagggaacagacacttagggatatctgttgcacagatgtagctg 440
Query: 245 ggatatatatgtatgtatgcatgcatgcatgcatgactatatatgtatttacgtattgtg 304
|||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 441 ggatatgtatgtatgtatgcatgcatgcatgcatgactatatatgtatttacatattgtg 500
Query: 305 ctagtgatggaggatggggacctcacacatgctaagcacacacctttccactaagttaca 364
|| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 501 ctggtgatggaggatggggacctcacacatgctaagcacacccctttccactaagttaca 560
Query: 365 tccctagtcaacaggtgtatttggcacagtcttggtgccctgaagagacccagaggcaga 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tccctagtcaacaggtgtatttggcacagtcttggtgccctgaagagacccagaggcaga 620
Query: 425 gatggaaaacagcgccccaagtggttagacagggaaacagtctcatcagttcatccccct 484
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||
Sbjct: 621 gatggaaaacagcgccccaagtggttagatagggaaacagtctcatcagttcatccctct 680
Query: 485 ctctgtccttagtatattctaagatcagacaaactgtttaatcatccttcagttttatcg 544
|||||||||||||||||||||||||||||||| || ||||||||||||||||||||| |
Sbjct: 681 ctctgtccttagtatattctaagatcagacaagttgcttaatcatccttcagttttattg 740
Query: 545 tttgtggaataggagtgacagtgtctctgttgtaaggacattgtgaagaatacacatgtg 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tttgtggaataggagtgacagtgtctctgttgtaaggacattgtgaagaatacacatgtg 800
Query: 605 cccgttagttttatgtcagcgtgtcactaatt 636
|||| ||||||||||||||| |||||||||||
Sbjct: 801 cccgctagttttatgtcagcatgtcactaatt 832
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1032
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1022
Effective search space: 639772
Effective search space used: 639772
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no210_c07.g1 MSMg01no210_c07.g1 CHROMAT_FILE:
MSMg01no210_c07.g1 PHD_FILE: MSMg01no210_c07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:34:33 2005
(293 letters)
>mm_chr18_62012637_62013329
Length = 693
Score = 563 bits (291), Expect = e-165
Identities = 291/291 (100%)
Strand = Plus / Minus
Query: 1 tctggggtgcactgtgtgtttctgtgtgtgctgaagtctcagaaacaggacaggctttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 tctggggtgcactgtgtgtttctgtgtgtgctgaagtctcagaaacaggacaggctttct 432
Query: 61 ctaccgagtgaaagcctaatatagggacaagtgctagaagagagagatctaacatgcctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 ctaccgagtgaaagcctaatatagggacaagtgctagaagagagagatctaacatgcctc 372
Query: 121 caccatagttttgcagattgggatatccagaaggatgagggagaagttgttaaagacaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 caccatagttttgcagattgggatatccagaaggatgagggagaagttgttaaagacaaa 312
Query: 181 cgagtgggcatgtgagcggtttccaggggaacaaaggcccttggcttagctcagaaataa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 cgagtgggcatgtgagcggtttccaggggaacaaaggcccttggcttagctcagaaataa 252
Query: 241 aagcatctacccgtgcacccaccaagtatatttccttgaagtatcctctgc 291
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 aagcatctacccgtgcacccaccaagtatatttccttgaagtatcctctgc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 693
Length adjustment: 9
Effective length of query: 284
Effective length of database: 684
Effective search space: 194256
Effective search space used: 194256
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
