Query= MSMg01no214_c13.b1 MSMg01no214_c13.b1 CHROMAT_FILE:
MSMg01no214_c13.b1 PHD_FILE: MSMg01no214_c13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:40:23 2005
(643 letters)
>mm_chr18_21636850_21637892
Length = 1043
Score = 1011 bits (523), Expect = 0.0
Identities = 550/559 (98%), Gaps = 2/559 (0%)
Strand = Plus / Minus
Query: 36 agggaaaggtgtggggaatctgaacaatgagtccagatgaggacctcccatgct-ctccg 94
|||||||||||||||||||||||||||||||||||||||||||||||||||| | || |
Sbjct: 561 agggaaaggtgtggggaatctgaacaatgagtccagatgaggacctcccatg-tgctaag 503
Query: 95 ctgcaggaggggaaattatgatgttgaatatcaatttgtggtcttgctcattgcagttga 154
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 ctgctggaggggaaattatgatgttgaatatcaatttgtggtcttgctcattgcagttga 443
Query: 155 aatgtaggtgaagattacattcaagaaccatgtgactggaattttgatatagagtttcta 214
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 442 aatgtaggtgaagattacattcaagaaccatgtgactggaattttgatgtagagtttcta 383
Query: 215 aggtagaattttgaactttgcatcatgaaaaccttcaattttatataaaaattggtccca 274
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 382 aggtagaattttgaactttgcatcatgaaaaccttcaattttatataaaaattgatccca 323
Query: 275 caggaaatccttaatcccaaattctaaatctgataaacaaaggcaggtctaaatgtttaa 334
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 322 caggaaatccttaatcccaaattctaaatctgatagacaaaggcaggtctaaatgtttaa 263
Query: 335 agaaagattagaaaactaggaaaccaattagtcagtaaagtgttccccttgctagcaaga 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 agaaagattagaaaactaggaaaccaattagtcagtaaagtgttccccttgctagcaaga 203
Query: 395 ggacctgagttggtcatcaaacgtacatcatcattgtcggtttgatttattttgttttgc 454
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 202 ggacctgagttggtcatcaaacgtacatcatcgttgtcggtttgatttattttgttttgc 143
Query: 455 tttgtgttttaaagcagagtgggaccgtgcattcttgtcatgccagtactggacaggtga 514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 tttgtgttttaaagcagagtgggaccgtgcattcttgtcatgccagtactggacaggtga 83
Query: 515 agacaaggtgaagccatgtgtttcactgtctatcttagtgttcttggtgagtcacaaccc 574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82 agacaaggtgaagccatgtgtttcactgtctatcttagtgttcttggtgagtcacaaccc 23
Query: 575 agcaagagactctgtctca 593
|||||||||||||||||||
Sbjct: 22 agcaagagactctgtctca 4
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 643
Length of database: 1043
Length adjustment: 10
Effective length of query: 633
Effective length of database: 1033
Effective search space: 653889
Effective search space used: 653889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no214_c13.g1 MSMg01no214_c13.g1 CHROMAT_FILE:
MSMg01no214_c13.g1 PHD_FILE: MSMg01no214_c13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:40:23 2005
(282 letters)
>mm_chr18_21516937_21517618
Length = 682
Score = 514 bits (266), Expect = e-150
Identities = 278/282 (98%)
Strand = Plus / Plus
Query: 1 atggttctgggaaggcaaggaacactcagacagacatgtctccccccatgttgtgatgtg 60
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 201 atggttctgggaaggcaaggaacactcagacagacatgtctccccaaatgttgtgatgtg 260
Query: 61 gaagagactaaggtgaaaggagatagaaccatgcacttaatctgctttcattctatgcca 120
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaagagtctaaggtgaaaggagatagaaccatgcacttaatctgctttcattctatgcca 320
Query: 121 aagggcagttgaataaacactcctcaacacagtacagcccacatcaccttgggactggct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagggcagttgaataaacactcctcaacacagtacagcccacatcaccttgggactggct 380
Query: 181 agtgcttctctttgtgtgcaataggcccttattcaacacctctgattctcttgctccaga 240
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 381 agtgcttctctttgtgtgcaataggcccttattcatcacctctgattctcttgctccaga 440
Query: 241 tgactttgaaagaacggatctctgttcattaacagtgagagg 282
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgactttgaaagaacggatctctgttcattaacagtgagagg 482
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 682
Length adjustment: 9
Effective length of query: 273
Effective length of database: 673
Effective search space: 183729
Effective search space used: 183729
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
