Query= MSMg01no231_o07.b1 MSMg01no231_o07.b1 CHROMAT_FILE:
MSMg01no231_o07.b1 PHD_FILE: MSMg01no231_o07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:48:16 2005
(318 letters)
>mm_chr18_7756812_7757529
Length = 718
Score = 574 bits (297), Expect = e-168
Identities = 309/313 (98%), Gaps = 2/313 (0%)
Strand = Plus / Plus
Query: 5 gaattcggatatattcctagtctgagcctggaacctctggcctcccttgaaatctatgaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcggatatattcctagtctgagcctggaacctctggcctcccttgaaatctatgaa 264
Query: 65 acctctaaga-aactccgagcggaccaggcaaggaggaagagcaggttagtagagcacag 123
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 acctctaagacaactccgagcggaccaggcaaggaggaagagcaggttagtagagcacag 324
Query: 124 acaagtagaccaaggagccagggaggactggaacaccccaccctaaaggcaagtctgacc 183
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 325 acaagtagaccaaggagccagggaggactggaacgccccaccctaaaggcaagtctgacc 384
Query: 184 agaagaagagccaagggtgaaggtagaagcctccaagcctaatgagagagtggctggtga 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agaagaagagccaagggtgaaggtagaagcctccaagcctaatgagagagtggctggtga 444
Query: 244 aaacgctattaagacgggtgaattattgaaaaatccaccaagaactggatctttaaagta 303
|||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 445 aaacgctattaagacgggtgaattattgaaaattc-accaagaactggatctttaaagta 503
Query: 304 ccaactggtactt 316
|||||||||||||
Sbjct: 504 ccaactggtactt 516
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 718
Length adjustment: 9
Effective length of query: 309
Effective length of database: 709
Effective search space: 219081
Effective search space used: 219081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no231_o07.g1 MSMg01no231_o07.g1 CHROMAT_FILE:
MSMg01no231_o07.g1 PHD_FILE: MSMg01no231_o07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:48:16 2005
(285 letters)
>mm_chr18_7815721_7816405
Length = 685
Score = 493 bits (255), Expect = e-144
Identities = 276/283 (97%), Gaps = 2/283 (0%)
Strand = Plus / Minus
Query: 1 atggtatgttgagaacagttgtgtatgtgtgatattaaagatgatgcacagctacatgcc 60
|||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 323 atggtatgttcagaacagttgtatatgtgtgatattaaagatgatgcacagctacatgcc 264
Query: 61 agcaataccgctggactgaacagttaaatcattcaatggtacattttaaaatatatccta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 agcaataccgctggactgaacagttaaatcattcaatggtacattttaaaatatatccta 204
Query: 121 aattgccactgatcgggctcagtcggccccgttcaatccgtgggaatcagggcctcggac 180
|||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 203 aattgccactgatcgggctcagtcgggcctgttcaatccgtgggaatcagggcctcggac 144
Query: 181 agatgggtgagaattgacagacagaagcagacagg-gctgtgctgaatctgaatgtaatg 239
||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 143 agatgggtgagaattgacagacagaagcagacaggag-tgtgctgaatctgaatgtaatg 85
Query: 240 tcacatagcgaacaccagtcttatataatacagaaaacaaagg 282
||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 84 tcacaaagcgaacaccagtcttatataatacagaaaacaaagg 42
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 685
Length adjustment: 9
Effective length of query: 276
Effective length of database: 676
Effective search space: 186576
Effective search space used: 186576
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
