Query= MSMg01no261_c19.b1 MSMg01no261_c19.b1 CHROMAT_FILE:
MSMg01no261_c19.b1 PHD_FILE: MSMg01no261_c19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:57:30 2005
(164 letters)
>mm_chr18_43760129_43760700
Length = 572
Score = 259 bits (134), Expect = 6e-74
Identities = 157/168 (93%), Gaps = 8/168 (4%)
Strand = Plus / Minus
Query: 1 ttctcttcttctacc-catgggtaagtcctaaaaatcaaattcatgctgtcaggttttcc 59
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ttctcttcttctaccacatgggtaagtcctaaaaatcaaattcatgctgtcaggttttcc 309
Query: 60 tcagctaagctgttt-ctctgtccttcctattttgtaaatg------attattttgtaat 112
||||||||||| ||| ||||||||||| ||||||||||||| |||||||||||||
Sbjct: 308 tcagctaagctttttcctctgtccttcatattttgtaaatgatccatattattttgtaat 249
Query: 113 ttattactatcctataccacaacacaagcagaatgttgccgttatatg 160
|||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 248 ttattactatcctataccacaacacaagcagaatgttgccattatatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 164
Length of database: 572
Length adjustment: 8
Effective length of query: 156
Effective length of database: 564
Effective search space: 87984
Effective search space used: 87984
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no261_c19.g1 MSMg01no261_c19.g1 CHROMAT_FILE:
MSMg01no261_c19.g1 PHD_FILE: MSMg01no261_c19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:57:30 2005
(164 letters)
>mm_chr18_43617482_43618045
Length = 564
Score = 302 bits (156), Expect = 9e-87
Identities = 162/164 (98%)
Strand = Plus / Plus
Query: 1 gcaaactcactcacccggtccctcaaaggtttcttttgttactgccaattaaataagctg 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gcaaactcactcacccgttccctcaaaggtttcttttgttactgccaattaaataagctg 260
Query: 61 ctcaatgaagaagcctgcctcctgacaagtctgtttcttgccatgctcacctgttgccta 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 261 ctcaatgaagaagcctgcctcctgagaagtctgtttcttgccatgctcacctgttgccta 320
Query: 121 aggtctcctcacctgtgaactctgtcacactcaaccattgctgt 164
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aggtctcctcacctgtgaactctgtcacactcaaccattgctgt 364
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 164
Length of database: 564
Length adjustment: 8
Effective length of query: 156
Effective length of database: 556
Effective search space: 86736
Effective search space used: 86736
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
