Query= MSMg01no265_o07.b1 MSMg01no265_o07.b1 CHROMAT_FILE:
MSMg01no265_o07.b1 PHD_FILE: MSMg01no265_o07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:03:32 2005
(223 letters)
>mm_chr18_75769777_75770399
Length = 623
Score = 398 bits (206), Expect = e-115
Identities = 215/218 (98%)
Strand = Plus / Minus
Query: 1 tcgtgggtcacctactggggcatctgggaggtttccttgaatacatctcagattcagtag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 tcgtgggtcacctactggggcatctgggaggtttccttgaatacatctcagattcagtag 252
Query: 61 gtgtgaggttcctttccctgaagctgtgcccaacctgtgattggtggacagcatgtggct 120
|||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct: 251 gtgtgaggttcctttccctgaagctgtgcccaacctgtgattggtggacagcgtgcggct 192
Query: 121 tcatgccgctaaggatagctatgaatggacgcttgattcaaaagtgcacacttccttaag 180
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 tcatgccgccaaggatagctatgaatggacgcttgattcaaaagtgcacacttccttaag 132
Query: 181 acactatgaggtgtgtgtgtgtgtgtgtgtgtgtgtgt 218
||||||||||||||||||||||||||||||||||||||
Sbjct: 131 acactatgaggtgtgtgtgtgtgtgtgtgtgtgtgtgt 94
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 223
Length of database: 623
Length adjustment: 9
Effective length of query: 214
Effective length of database: 614
Effective search space: 131396
Effective search space used: 131396
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no265_o07.g1 MSMg01no265_o07.g1 CHROMAT_FILE:
MSMg01no265_o07.g1 PHD_FILE: MSMg01no265_o07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:03:32 2005
(287 letters)
>mm_chr18_75616636_75617321
Length = 686
Score = 524 bits (271), Expect = e-153
Identities = 283/287 (98%), Gaps = 1/287 (0%)
Strand = Plus / Plus
Query: 1 ttcctgcaagtgtgtttgcatttccaaaggagtgtttgcacttcctaagtctagctagct 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 201 ttcctgcaagtgtgtttgcatttccaaa-gagtgtttgcacttcctaagtctagctagct 259
Query: 61 ttcaaccctgggaaaccagatgcagtaaatacttctatgttttaatacctctgagaaagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ttcaaccctgggaaaccagatgcagtaaatacttctatgttttaatacctctgagaaagg 319
Query: 121 gagaaagtcttaattacagaaatggtcgccctaagtagtccagagggcagtgaaagaatg 180
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 320 gagaaagtcttaattacagaaatggtcgccctaagtagtccggagggcagtgaaagaatg 379
Query: 181 ggccgattgtgccttcttcatgccgggcactgtagggaggccctggcactgatccccact 240
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 380 ggccgattgtgccttcttcatgccgggcactctagggaggccctggcactgatccccacc 439
Query: 241 gtgggttctcctctgagccctctcatgtgctgccaccccagccaggg 287
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gtgggttctcctctgagccctctcatgtgctgccaccccagccaggg 486
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 686
Length adjustment: 9
Effective length of query: 278
Effective length of database: 677
Effective search space: 188206
Effective search space used: 188206
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
