Query= MSMg01no268_c12.b1 MSMg01no268_c12.b1 CHROMAT_FILE:
MSMg01no268_c12.b1 PHD_FILE: MSMg01no268_c12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:06:23 2005
(313 letters)
>mm_chr18_62137243_62137951
Length = 709
Score = 540 bits (279), Expect = e-158
Identities = 300/309 (97%), Gaps = 4/309 (1%)
Strand = Plus / Plus
Query: 4 ggaattccctagtctgtatcacagtcatcgagagggggagcttccctcccttaagtcttt 63
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccctcgtctgtatcacagtcatcgagagggggagcttccctcccttaagtc--- 260
Query: 64 ccagttgacctgtgtgttgtttcccacaggcagaggacggtgcaaggctctgatggatta 123
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 -cagttgacctgtgtgttgtttcccacaggcagaggacggtgcaaggctctgatggatta 319
Query: 124 tgagcaggaggaaagagacgaactgtgtttcctccagggtgaaagcattgaagtcattgg 183
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 320 tgagcaggaggaaagagacgaactgtgtttcctccagggtgaaagcattgacgtcatcgg 379
Query: 184 ctttgtcatacctgggctgcagtggttcattgggaagtcagtgagctcaggagaagtggg 243
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 380 ctttgtcatacctgggctgcagtggttcattgggaagtcagtgagttcaggagaagtggg 439
Query: 244 ctttgtccccaccaggagcatcgatcttgattcctgctccccgatgtgagtatgctttgg 303
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 440 ctttgtccccaccaggagcatcgatcttgattcttgctccccgatgtgagtatgctttgg 499
Query: 304 ggcccagct 312
|||||||||
Sbjct: 500 ggcccagct 508
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 709
Length adjustment: 9
Effective length of query: 304
Effective length of database: 700
Effective search space: 212800
Effective search space used: 212800
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no268_c12.g1 MSMg01no268_c12.g1 CHROMAT_FILE:
MSMg01no268_c12.g1 PHD_FILE: MSMg01no268_c12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:06:23 2005
(241 letters)
>mm_chr18_62277161_62277801
Length = 641
Score = 451 bits (233), Expect = e-131
Identities = 236/237 (99%)
Strand = Plus / Minus
Query: 5 gccaaccctttgcatgctggctattttactgtgttccttcaccgctccctgaattgagcc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gccaaccctttgcatgctggctattttactgtgttccttcaccgctccctgaattgagcc 382
Query: 65 tccacacaaagctgcaagatcaattagagaacacataaaatgagctacttaatttatgtt 124
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 381 tccacacaaagctgcaagatcaattagagaacacataaaatgaactacttaatttatgtt 322
Query: 125 tctcagagggatataaaacatttggctcacaggcttttaagacgggtcacagaacataaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctcagagggatataaaacatttggctcacaggcttttaagacgggtcacagaacataaa 262
Query: 185 actatatttaataagtacaatgtactaaaaatatcctttagtgagacagactgatgc 241
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 actatatttaataagtacaatgtactaaaaatatcctttagtgagacagactgatgc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 641
Length adjustment: 9
Effective length of query: 232
Effective length of database: 632
Effective search space: 146624
Effective search space used: 146624
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
