Query= MSMg01no270_m24.b1 MSMg01no270_m24.b1 CHROMAT_FILE:
MSMg01no270_m24.b1 PHD_FILE: MSMg01no270_m24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:09:34 2005
(631 letters)
>mm_chr18_58330734_58331766
Length = 1033
Score = 1181 bits (611), Expect = 0.0
Identities = 627/633 (99%), Gaps = 2/633 (0%)
Strand = Plus / Minus
Query: 1 gaagtccttagggatctttttctgtgggttttcttccagataactaactgggctgtggtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 783 gaagtccttagggatctttttctgtgggttttcttccagataactaactgggctgtggtt 724
Query: 61 cagctcattgtccccataaagctacctgcatcctcttgcttgcttaccaccaaaatttcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 cagctcattgtccccataaagctacctgcatcctcttgcttgcttaccaccaaaatttcc 664
Query: 121 atgttcaaaagtattcttatgtaatattttaaatatttaaatagttcttgtgaactaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 atgttcaaaagtattcttatgtaatattttaaatatttaaatagttcttgtgaactaaat 604
Query: 181 ctctgagtgcttgttcaggattggagct--agacagtcagtggtctgcatctcctcagct 238
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 603 ctctgagtgcttgttcaggattggagctagagacagtcagtggtctgcatctcctcagct 544
Query: 239 tgctgtccttactggaaacctctcccctttgcagcatactgcaacagtagaagtgtctgc 298
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 543 tgctgtccttactggaaacctctcccctttgcagcatactgcaacagtagcagtgtctgc 484
Query: 299 cctagtgttcttggccagatgcaccctgagtagcagggtagtatccattccttcagagct 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 cctagtgttcttggccagatgcaccctgagtagcagggtagtatccattccttcagagct 424
Query: 359 ctaacctgtctgtccccgcaagtgaacttctgcaataccaagctgaggacacgagtcata 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 ctaacctgtctgtccccgcaagtgaacttctgcaataccaagctgaggacacgagtcata 364
Query: 419 gcctgccttcccgggaagacaagactcagcccttaaaagaaaagggagaaggggtgatgt 478
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 gcctgtcttccccggaagacaagactcagcccttaaaagaaaagggagaaggggtgatgt 304
Query: 479 ctcgctgttcttgcttgtactggaacctcctcaccctgagctggcacatcagaaggaggg 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 ctcgctgttcttgcttgtactggaacctcctcaccctgagctggcacatcagaaggaggg 244
Query: 539 cgtggctcccaaagacacagactcttgctgttactgcaatgttgtagactttcttgaaga 598
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 243 cgtggctcccaaagacacagactcttgctgttactgcagtgttgtagactttcttgaaga 184
Query: 599 catgttaattagtctgctttgtgcccctaggac 631
|||||||||||||||||||||||||||||||||
Sbjct: 183 catgttaattagtctgctttgtgcccctaggac 151
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 631
Length of database: 1033
Length adjustment: 10
Effective length of query: 621
Effective length of database: 1023
Effective search space: 635283
Effective search space used: 635283
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no270_m24.g1 MSMg01no270_m24.g1 CHROMAT_FILE:
MSMg01no270_m24.g1 PHD_FILE: MSMg01no270_m24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:09:34 2005
(295 letters)
>mm_chr18_58177567_58178261
Length = 695
Score = 534 bits (276), Expect = e-156
Identities = 288/292 (98%)
Strand = Plus / Plus
Query: 1 ctagccaggcacggtgatgtatgtctgaagtccttgtcctgggggagtagaggtagcagg 60
||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 201 ctagccaggcacggtaatgtatgtctgaagtccttgccctgggggagtagaggtggcagg 260
Query: 61 atctaggatagcctggggctacatagcaagttatagacaggaggccctgtcacaaaagga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atctaggatagcctggggctacatagcaagttatagacaggaggccctgtcacaaaagga 320
Query: 121 tggaaagggccctttagagttagaccagggtaatgggtgaacacttccgcgaactaaatc 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 321 tggaaagggccctttagagttagaccagggtaatgggtgaacacttccgtgaactaaatc 380
Query: 181 taacaaattagtattgaaaagcagcagagcatggttttgagaccagccccaacctcacag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taacaaattagtattgaaaagcagcagagcatggttttgagaccagccccaacctcacag 440
Query: 241 tacatcaaaagtcaaaatgacgacacctctagttgatgtgccgttaaatatt 292
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tacatcaaaagtcaaaatgacgacacctctagttgatgtgccgttaaatatt 492
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 295
Length of database: 695
Length adjustment: 9
Effective length of query: 286
Effective length of database: 686
Effective search space: 196196
Effective search space used: 196196
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
