Query= MSMg01no272_a09.b1 MSMg01no272_a09.b1 CHROMAT_FILE:
MSMg01no272_a09.b1 PHD_FILE: MSMg01no272_a09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:11:03 2005
(346 letters)
>mm_chr18_28423634_28424380
Length = 747
Score = 625 bits (323), Expect = 0.0
Identities = 341/347 (98%), Gaps = 1/347 (0%)
Strand = Plus / Plus
Query: 1 tttgcaaaataccagtggctagaagctgttgagttacaacttgagcctatataggaacta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgcaaaataccagtggctagaagctgttgagttacaacttgagcctatataggaacta 260
Query: 61 ctatttaagggcaataaaaactggggaagaacagagtggaaagcacaggcaaccgctgca 120
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctatttaaaggcaataaaaactggggaagaacagagtggaaagcacaggcaaccgctgca 320
Query: 121 agagctggcagatggcttcctctatgaaggacttaccctaaaagtattaggacttgagtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agagctggcagatggcttcctctatgaaggacttaccctaaaagtattaggacttgagtt 380
Query: 181 ccttcccagaagtcatgtgataaagacaggcatgctgcaagattcaccagtaaaatggca 240
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 381 ccttcccagaagtcatgtgataaagacaggcatgctacaagattcaccagtaaaatggca 440
Query: 241 gcacagagttt-gtggttctaacagatacatgctttgtggttttgtgttaaggtcaatga 299
||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 441 gcacaaagttttgtggttctaacagatacatgctttgtggttttgtgttaaggtcaacca 500
Query: 300 aatgagagagaactcctgctcctaatactgctctaatgactaggacc 346
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aatgagagagaactcctgctcctaatactgctctaatgactaggacc 547
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 346
Length of database: 747
Length adjustment: 9
Effective length of query: 337
Effective length of database: 738
Effective search space: 248706
Effective search space used: 248706
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no272_a09.g1 MSMg01no272_a09.g1 CHROMAT_FILE:
MSMg01no272_a09.g1 PHD_FILE: MSMg01no272_a09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:11:03 2005
(299 letters)
>mm_chr18_28572030_28572728
Length = 699
Score = 547 bits (283), Expect = e-160
Identities = 295/299 (98%)
Strand = Plus / Minus
Query: 1 aggaaaccaaaggaccaaaattatgtttgcttatttgaatgagaaactatgcttttatgg 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 499 aggaaaccaaaggaccaaaattaggtttgcttatttgaatgagaaactatgcttttatgg 440
Query: 61 aaactgctttttggataaaaacatattattggctagttaaagggcattatacaaattact 120
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 439 aaactgctttttggataaaaacatattattggctagttaaaggacattatacaaattact 380
Query: 121 ttatacaagccactcatttgtagtagaaaatatggacaccaagaggattttcaacctatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ttatacaagccactcatttgtagtagaaaatatggacaccaagaggattttcaacctatg 320
Query: 181 ctactatattatggtattgtgtgatgcttaaggcacactcaggaaaagaaaaataaagcc 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ttactatattatggtattgtgtgatgcttaaggcacactcaggaaaagaaaaataaagcc 260
Query: 241 cagaaagctagctggatatgagagggctgagtataccatggacagaccgatagggagac 299
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 259 cagaaagctagctggatatgagagggctgagtataccatggacagactgatagggagac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 299
Length of database: 699
Length adjustment: 9
Effective length of query: 290
Effective length of database: 690
Effective search space: 200100
Effective search space used: 200100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
