Query= MSMg01no275_l22.b1 MSMg01no275_l22.b1 CHROMAT_FILE:
MSMg01no275_l22.b1 PHD_FILE: MSMg01no275_l22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:15:32 2005
(311 letters)
>mm_chr18_23456361_23457071
Length = 711
Score = 572 bits (296), Expect = e-168
Identities = 308/312 (98%), Gaps = 2/312 (0%)
Strand = Plus / Minus
Query: 1 acattgctgaaagtaagttattttagagtttgtggttcattacccagctaacaaattata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 acattgctgaaagtaagttattttagagtttgtggttcattacccagctaacaaattata 532
Query: 61 taattttatattaaattaaagattccctaggtttaataaatatgactcatttgctatttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 taattttatattaaattaaagattccctaggtttaataaatatgactcatttgctatttc 472
Query: 121 aagaaagttccagtgaagccagatttcctacatattcactaaacttgatgctaataagcg 180
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 471 aagaaagttccagtgaagccagatttcctatatattcactaaacttgatgctaataagcg 412
Query: 181 ctgcactcactttttattgaaagatttttttctggtcccaagtaagagttcattttcata 240
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 411 ctgcactcactttttattgaaagatttttttctagtcccaagtaagagttcattttcata 352
Query: 241 actca-gtaggatcacggttacagaccagccaaatggagcagcagcaccttgagtggcat 299
||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 act-aggtaggatcacggttacagaccagccaaatggagcagcagcaccttgagtggcat 293
Query: 300 tttgcaactgct 311
||||||||||||
Sbjct: 292 tttgcaactgct 281
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 311
Length of database: 711
Length adjustment: 9
Effective length of query: 302
Effective length of database: 702
Effective search space: 212004
Effective search space used: 212004
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no275_l22.g1 MSMg01no275_l22.g1 CHROMAT_FILE:
MSMg01no275_l22.g1 PHD_FILE: MSMg01no275_l22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:15:32 2005
(310 letters)
>mm_chr18_23301017_23301726
Length = 710
Score = 569 bits (294), Expect = e-166
Identities = 306/310 (98%)
Strand = Plus / Plus
Query: 1 agatatagcaatataaataaaattgttctaagcaataaataaataaaccaggactctgga 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agatatagcaacataaataaaattgttctaagcaataaataaataaaccaggactctgga 260
Query: 61 agcctatgtacattagtcacaacacagactttgataccattttttagtcttatgtgtgta 120
||||||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||
Sbjct: 261 agcctatgtacattagttacaacacagactttgatgccattttttaatcttatgtgtgta 320
Query: 121 cttttagtgatttctatataattgtgaatactttgtgattttaagggaagtctctttgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttttagtgatttctatataattgtgaatactttgtgattttaagggaagtctctttgtt 380
Query: 181 agcatatataaattgaacaaaatcaggtttcagtatgacattttcatatgtataatttat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agcatatataaattgaacaaaatcaggtttcagtatgacattttcatatgtataatttat 440
Query: 241 atatctatagtttacattgtatatatttatattcatcatatattagctatagcctccaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atatctatagtttacattgtatatatttatattcatcatatattagctatagcctccaag 500
Query: 301 gactctgccc 310
||||||||||
Sbjct: 501 gactctgccc 510
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 310
Length of database: 710
Length adjustment: 9
Effective length of query: 301
Effective length of database: 701
Effective search space: 211001
Effective search space used: 211001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
