Query= MSMg01no276_o14.b1 MSMg01no276_o14.b1 CHROMAT_FILE:
MSMg01no276_o14.b1 PHD_FILE: MSMg01no276_o14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:16:56 2005
(679 letters)
>mm_chr18_70341924_70343002
Length = 1079
Score = 1266 bits (655), Expect = 0.0
Identities = 673/679 (99%), Gaps = 1/679 (0%)
Strand = Plus / Plus
Query: 1 tgcctattcagtgacattcagaattgcctctagtattacactatcacttagaatacaagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 202 tgcctattcagtgacattcagaattgcctctagtattacactatcacttagaataaaagc 261
Query: 61 caagtcgctctcatatacaggaatttacaatggtttaggaagtagatcgggctgaggttt 120
||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct: 262 caagtcgctctcatatacaggaattta-attggtttaggaagtagatcgggctgaggttt 320
Query: 121 tagagtattgcattattcatgagatggttagctagaacagaactccctaattagaaccat 180
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 321 tagagtattgcattattcatgagatggttagctagaacagaactctctaattagaaccat 380
Query: 181 gacttgggtgtgaaagcccttgccctaggagtgtaaagacctcacacctggcttctaaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gacttgggtgtgaaagcccttgccctaggagtgtaaagacctcacacctggcttctaaga 440
Query: 241 atatggctgaccttagatagggctgactttgtctcagttattttattgcccagttcctgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atatggctgaccttagatagggctgactttgtctcagttattttattgcccagttcctgc 500
Query: 301 cagtctttgtgtttacatccctctgttttgtgtaagagtcattaagcatccggtaacctc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cagtctttgtgtttacatccctctgttttgtgtaagagtcattaagcatccggtaacctc 560
Query: 361 atttgtaccttgctgatgtgtcacctgacttccctattttcttctgtataaaaaatttga 420
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 561 atttgtaccttgctgatgtgtcacctgacttctctattttcttctgtataaaaaatttga 620
Query: 421 tgctcaatttgacaaattacattcagattctacacaatctctcctgtgtgcatctgtcta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgctcaatttgacaaattacattcagattctacacaatctctcctgtgtgcatctgtcta 680
Query: 481 tcattcaattccctccaactccttgcccacctgtgaccagagacctgttccacgcagaca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tcattcaattccctccaactccttgcccacctgtgaccagagacctgttccacgcagaca 740
Query: 541 aggggcccagagggtctgcagcagctgcacattagagttaaatggccactgcgatgggtc 600
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 741 aggggcccagagggtctgcagcagctgcacattagagttaaatggccactgcaatgggtc 800
Query: 601 agagtcacaggagcagagattaatagcacacagggaaaggaaggtagggttgggagagaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 agagtcacaggagcagagattaatagcacacagggaaaggaaggtagggttgggagagaa 860
Query: 661 cacagccatctgtgaggag 679
|||||||||||||||||||
Sbjct: 861 cacagccatctgtgaggag 879
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 679
Length of database: 1079
Length adjustment: 10
Effective length of query: 669
Effective length of database: 1069
Effective search space: 715161
Effective search space used: 715161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no276_o14.g1 MSMg01no276_o14.g1 CHROMAT_FILE:
MSMg01no276_o14.g1 PHD_FILE: MSMg01no276_o14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:16:56 2005
(671 letters)
>mm_chr18_70446869_70447939
Length = 1071
Score = 1259 bits (651), Expect = 0.0
Identities = 665/670 (99%)
Strand = Plus / Minus
Query: 1 ttgtcatagtagttggcagatagaacatctctagtgtcttctgctgctctggatgctctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 870 ttgtcatagtagttggcagatagaacatctctagtgtcttctgctgctctggatgctctg 811
Query: 61 gctgaagccactgtaaacaccctccctcacccccatgtgctcttagtcttctgagcttct 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 810 actgaagccactgtaaacaccctccctcacccccatgtgctcttagtcttctgagcttct 751
Query: 121 cctgacctcctccccgcctctgtgcctcactcagactttcttctggtatattaaagtcac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 cctgacctcctccccgcctctgtgcctcactcagactttcttctggtatattaaagtcac 691
Query: 181 tcaaggcttggctagggtctagggttagtggagtgaaggaatctgataatactagcccat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 tcaaggcttggctagggtctagggttagtggagtgaaggaatctgataatactagcccat 631
Query: 241 tgccagtgttccaacgtcccactggcacccaaaacctgtcacttctatgtctattaggtc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 tgccagtgttccaacgtcccactggcacccaaaacctgtcacttctatgtctattaggtc 571
Query: 301 ttatttacatttcggctgcttttggtcaaggattcgataatatctaatattgctattgag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 ttatttacatttcggctgcttttggtcaaggattcgataatatctaatattgctattgag 511
Query: 361 ttttcctatcaaaataattcgactttaacaatgattccccaagtaattggctgaaaactc 420
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 ttttcctatcaaaacaattcgactttaacaatgattccccaagtaattggctgaaaactc 451
Query: 421 acaggcaaattcttaatattatttgttagtattccttatcaatatcatttttgttttgag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 acaggcaaattcttaatattatttgttagtattccttatcaatatcatttttgttttgag 391
Query: 481 gaaattaaatggtccatcagtgggaaggaagagttttggtgccaagagcatgttgctttt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 gaaattaaatggtccatcagtgggaaggaagagttttggtgccaagagcatgttgctttt 331
Query: 541 tagtaatagcactaaactcatgcaaatcattttatataaacacagaataattttaagcac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 tagtaatagcactaaactcatgcaaatcattttatataaacacagaataattttaagcac 271
Query: 601 cacactttggaaccctaatgtatgcagntttattttattttattttcttctcacactttt 660
|||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 270 cacactttggaaccctaatgtatgcaattttattttattttattttcttcttacactttt 211
Query: 661 gctgtttagt 670
||||||||||
Sbjct: 210 gctgtttagt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 671
Length of database: 1071
Length adjustment: 10
Effective length of query: 661
Effective length of database: 1061
Effective search space: 701321
Effective search space used: 701321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
