Query= MSMg01no291_g13.b1 MSMg01no291_g13.b1 CHROMAT_FILE:
MSMg01no291_g13.b1 PHD_FILE: MSMg01no291_g13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:26:11 2005
(344 letters)
>mm_chr18_68243980_68244723
Length = 744
Score = 489 bits (253), Expect = e-143
Identities = 315/349 (90%), Gaps = 26/349 (7%)
Strand = Plus / Minus
Query: 1 taacataaaggtgaagttaccttctccagtaagctactgagacatgtgtcaccgaaacca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 taacataaaggtgaagttaccttctccagtaagctactgagacatgtgtcaccgaaacca 287
Query: 61 agggacaaagaggacacttgtcttccttctgtggatctgcatgataccaagcattccaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 agggacaaagaggacacttgtcttccttctgtggatctgcatgataccaagcattccaca 227
Query: 121 aaggaatgcccaggtagtatcattcactttgtttcttttctttttt--tttt-tttt--- 174
|||||||||||| ||||||||||||| ||||||||||||||||||| |||| ||||
Sbjct: 226 aaggaatgcccaagtagtatcattcattttgtttcttttcttttttggttttgttttgtt 167
Query: 175 ttg----gttt-----------gttttgttttttgagccggtttctctgtatagtatagc 219
||| |||| ||||||||||||||| |||||||||||||||| |
Sbjct: 166 ttgttttgttttgttttgttttgttttgttttttgagacggtttctctgtatag-----c 112
Query: 220 cctggctgtcctggaactcactttgtagaccatgttggcctcgaactcagaaatccgcct 279
|||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||||
Sbjct: 111 cctggctgtcctggaactcactttgtagaccaggatggcctcgaactcaaaaatccgcct 52
Query: 280 gcctctgcctcccaagtgctgggattaaaggcgtgcgccaccactgtcc 328
|||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 51 gcctctgcctcccaagtgctgggattaaaggcatgcgccaccaccgtcc 3
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 744
Length adjustment: 9
Effective length of query: 335
Effective length of database: 735
Effective search space: 246225
Effective search space used: 246225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no291_g13.g1 MSMg01no291_g13.g1 CHROMAT_FILE:
MSMg01no291_g13.g1 PHD_FILE: MSMg01no291_g13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:26:11 2005
(217 letters)
>mm_chr18_68065274_68065890
Length = 617
Score = 398 bits (206), Expect = e-115
Identities = 212/214 (99%)
Strand = Plus / Plus
Query: 2 ttatcaatgggtttatggtatcattagtcttactcacaggcttctccttcaggagcttat 61
|||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 202 ttatcaatgggtttatggtatccttagtcttacccacaggcttctccttcaggagcttat 261
Query: 62 gatctcttgctccctctggtgtgcgtctgtggagctacaggtctcctgggatagaaaggt 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 gatctcttgctccctctggtgtgcgtctgtggagctacaggtctcctgggatagaaaggt 321
Query: 122 cttgtgttctgtgtcctccaaacatccacagtacagacagtccccactttacaaggggtt 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 cttgtgttctgtgtcctccaaacatccacagtacagacagtccccactttacaaggggtt 381
Query: 182 gagtgaaaagttctctactaaggtctgcattctg 215
||||||||||||||||||||||||||||||||||
Sbjct: 382 gagtgaaaagttctctactaaggtctgcattctg 415
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 217
Length of database: 617
Length adjustment: 9
Effective length of query: 208
Effective length of database: 608
Effective search space: 126464
Effective search space used: 126464
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|