ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCTTGTATCCTCTTTTATGACTTGAATAGTAAAATTTCATCTCCAAATGG
AGGGTGCTATTTACCTACATTTTATTACAAAGTCTGTATTCTTATAACCA
AGAGAGCTATTTATTTGTAAGCACTTGAATAGTAAATATTTTAACATTTC
TTCTGATTAATCCTGTGTCTCCTCCATAAATGTAGAAAAATACGATGTCA
TACAATGTTCATTTGAGTTTAAATGAAACTTGCTCCAAGGGTGCTCCTGA
TGAATGGACTTATTTTAAATGAGCATCTTGTATCTTCTAAAGCAGTTTCT
AAAATTTCAGATCAGGGTCCTGGGAACCAGTTGTGGGCATTTCATAATTC
TGGAACCCCCCACAAGTTGACAAAGGATTTTTAGTCACGTAGCTGAAGAA
AAGAGAAAGCTCTAGAAGAAGAGAAGCAAGAGACATTCTAATGTTAATGA
CGGCAGATGTGGGGGCAGGACTGGTTTTTATACTACAATGTTACACAATT
TATCATTTTTTACATGTTGATTACTTAATGTTCGATATAATATGCTTATG
AAATAAAGATCTAAATAAAATTGAAAATCATAGGAAGACTTCCCTTCATG
TGTCCCACATGTATGCTCTACACCAATGTCTGTCTGTCATCTATGTATCT
ATGTATCTATGTATCTATGTGTCTATCTATCTATCTATCTA

TACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXTTGCCAAAAAAAATTCGTTATGCAGAGAGAGGACAATATTTTAGA
ATGGATCTTCTTGGCCTACAAAAAAGAGTAAAAACCAAAAACTTATGTTG
AAAGGTTTCTGATGTAAAAGGAAGATTTTGTCAATGTTGAGGCCTGGCCT
CTAGCACAGCTGTATTTTGTTTCGTGCTGGTCAGCTATTTTATATTGTTA
CTTTAATATGCCTGTCAGTCATTTACAGAGATAAATAACTTCACTCAGAA
TAGGGTCATGTTTGACATATACCTTGCTATATATTCTGTATGTTATGAAG
TTTGTTATTGTTAACAAATTTTACAACTATAAGCTTCACATACGACCCAT
CAAATTACACCCCAATATGAACTGTTATGTCTAAAATAGCTTGAGTCAGT
GCTGACAACCAGGCAACACTTTCAGCGCCTGAGGATTAGCTCATTGTGGG
TTTTGCAGTTTTAGCCTTTGTCAGCTGACCGGAGAAAAGTCCAGTGTGTA
GCCTTCAGCTGTTACCCTGGTCAATCAGTTTTTAGGTGTGTATTCAATAA
ACTATCCCTGTCTGACTGAGATGGGTGGTTTGTGGTTTGTGGGGTGACTC
CTGAACCCTAACATTTGGTGCATTGGTGGGAAGCTCCCCACCCTCAAGCA
CTCCTCAGTTACTGACAGTAAATGCCACCAAGCCAGCTGGGCN

Query= MSMg01no291_i11.b1 MSMg01no291_i11.b1 CHROMAT_FILE:
MSMg01no291_i11.b1 PHD_FILE: MSMg01no291_i11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:26:20 2005
         (699 letters)



>mm_chr18_71166305_71167403
          Length = 1099

 Score = 1243 bits (643), Expect = 0.0
 Identities = 682/695 (98%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcttgtatcctcttttatgacttgaatagtaaaatttcatctccaaatggagggtg 64
           ||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctggtagcttcttttatgacttgaatagtaaaatttcatctccaaatggagggtg 264

                                                                       
Query: 65  ctatttacctacattttattacaaagtctgtattcttataaccaagagagctatttattt 124
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctatttacctagattttattacaaagtctgtattcttataaccaagagagctatttattt 324

                                                                       
Query: 125 gtaagcacttgaatagtaaatattttaacatttcttctgattaatcctgtgtctcctcca 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gtaagcacttgaatagtaaatattttaacatttcttctgattaatcctgtgtctcctcca 384

                                                                       
Query: 185 taaatgtagaaaaatacgatgtcatacaatgttcatttgagtttaaatgaaacttgctcc 244
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 taaatgtagaaaaatatgatgtcatacaatgttcatttgagtttaaatgaaacttgctcc 444

                                                                       
Query: 245 aagggtgctcctgatgaatggacttattttaaatgagcatcttgtatcttctaaagcagt 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aagggtgctcctgatgaatggacttattttaaatgagcatcttgtatcttctaaagcagt 504

                                                                       
Query: 305 ttctaaaatttcagatcagggtcctgggaaccagttgtgggcatttcataattctggaac 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 505 ttctaaaatttcagatcagggtcctgggaaccagttgtgggcatttcataattctggaag 564

                                                                       
Query: 365 cccccacaagttgacaaaggatttttagtcacgtagctgaagaaaagagaaagctctaga 424
           ||  || |||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 565 ccagcagaagttgacaaagaatttttagtcatgtagctgaagaaaagagaaagctctaga 624

                                                                       
Query: 425 agaagagaagcaagagacattctaatgttaatgacggcagatgtgggggcaggactggtt 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 agaagagaagcaagagacattctaatgttaatgacggcagatgtgggggcaggactggtt 684

                                                                       
Query: 485 tttatactacaatgttacacaatttatcattttttacatgttgattacttaatgttcgat 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tttatactacaatgttacacaatttatcattttttacatgttgattacttaatgttcgat 744

                                                                       
Query: 545 ataatatgcttatgaaataaagatctaaataaaattgaaaatcataggaagacttccctt 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ataatatgcttatgaaataaagatctaaataaaattgaaaatcataggaagacttccctt 804

                                                                       
Query: 605 catgtgtcccacatgtatgctctacaccaatgtctgtctgtcatctatgtatctatgtat 664
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 805 catgtgtcccacatgtatgctctacaccaatgtctgtctgtcatctatctatctatgtat 864

                                              
Query: 665 ctatgtatctatgtgtctatctatctatctatcta 699
           |||||||||||||||||||| ||||||||||||||
Sbjct: 865 ctatgtatctatgtgtctatgtatctatctatcta 899


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 43
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 699
Length of database: 1099
Length adjustment: 10
Effective length of query: 689
Effective length of database: 1089
Effective search space:   750321
Effective search space used:   750321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)